Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0029 ATGCCTTCAAGACCCTTCCCTCCCACAAATCCCACAAAAACAAAGGCCCTCTTCCTAGCACTTACCATTTCAGCCTGTGTTGTGATTTTTTGCTCAATCCTCTACTTCCTCTACCATCTGTGGCATTCTCTTGTTCACAGAGCTAAGACCATCCCCTTTGATGCAAGTGCTCCCTTGAAGCTCCAAAGATTCTCATACAAAGATTTAAAGCAAGCCACCAATGGCTTTGACACTGCCAATGTTATTGGCAAAGGTGGCTCTGGCACTGTTTTCAGAGGAATACTTAAAGATGGCAAGTTGATTGCCATCAAACGCCTGGACGCGTTGTCTTTGCAGTCAGAGAGAGAGTTTCAAAATGAACTGCAGATTCTTGGAGGGTTAAGGTCTCCATTCTTGGTGACCCTCTTGGGTTACTGTGTGGAAAAGAACAAAAGAGTGTTGGTGTATGAGTATATACCCAACAGAAGCTTGCAGGAGTCCCTCTTTGGAGATGAGGGTATGAGTTTGAGTTGGGAGAGCAGGTTATGCATAATATTGGATGTTGCTAGAGCTTTGGAGTTCTTGCACCTTGGATGTGATCCTCCAGTGATCCATGGGGATATCAAGCCAAGCAATGTTCTGATTGATTCTGAGTGGCGTGGGAAGATCTCTGACTTTGGCTTGTCAAGGATTAAGGTGGAGGGTGAGTTTGGTGTGGACTTGTTTAGCCAGGACTTGGGGAGGAGCCAGGATCTATGGAAAAGCCAAGAGCTCTCAGGTAATTTGACTAATTTGACTGCAGAAACTCCTGCTATTGGTACTCCAATTGAGAGTATTAGTGAAGTAGATTTTGCTCTAGCTTTGCAAGCCTCTTCTTCATCTAAAAATAGTAGGACTTGCTTTAATGTCAAAGCTTTGAACTTGAATTCTTTGAATTATAATGCCAATATTGCTAGTGAAACTGAAATTAGGAGTGTAAATGCAAAGGGTAAGGAAATTTCAGCTTTGGATAGGGATGATTGGAATGGTAAGTTTTTCCCTTGTGATGATGAGCTTTCTAGCATTGATTATAGTAAGGAGTTAACTGTGACTGCTTCTCCTTTGGTGGATGATGAGAAGGCAAATGGGAAACAATGGGGAAAGGACTGGTGGTGGAGACAGGATGGAAGTGGGGAGTTATGTAGTAAAGACTACGTAATGGAGTGGATAGGGAGTCAGATTTGTCCATCAAACGCTGATTGGGATGATGGTAAGAACAATGTTCACGCGAAAGTGGAGTTGGAAAATTCAAGTCCCAAGGATAAAGACCATGATGCTATTGCACCCCAATCACAGGTGTTTGGGATAGGACATAATACTACAGATAATGGGGTTGAGAAAAAAGAGTCAAGGGGAAAGAAATATCACAAAAAGAAGCACAGGAAGATGCAAGAGTGGTGGAAAGAAGAGCATCTTGCTGAATTAAGCAAGAAGACCAGTAAACTTAAAAATCTTCATACGAAGTGGAAGAAAGGCTTGAAAGTGCCCCATTTTGATTTGGGTAGAAGGTTTTATCTTTGCAGGCGTAAGAAGTTTGGACATGAGGGTGAGAATAAGTGTGATCAAAATGGGGAGTTTAGCTTCAGAAGAGGATGGAAGAAGAAAAGCACTCGTTCCATTGGAAGTGACATGTGGAGTGGAGATCTTTTCAGCCGTGAGCTCAGCAGCACAACAAGCATGAGAGGGACACTGTGTTATGTGGCACCAGAATATGGAGGATGTGGATTCTTAATGGAGAAAGCTGACATTTATAGTTTTGGAGTTTTGATTCTTGTAATTGTGTCAGGTAGGAGACCATTGCATGTTCTTGCATCACCCATGAAGCTAGAGAAAGCTAACTTAATAAGCTGGTGTAGACACTTGGCTCAAGATGGTAACATTTTAGAACTTGTGGATGAGAGATTGAAAGAAGATTACAACAAGGAACAAGCAAGTCTTTGTATCAACTTGGCACTCATTTGCTTACAGAAAATTCCAGAGCTGCGGCCAGATATTGGGGATATTGTTAAGATTTTGAAGGGGGAGATGGAGCTTCCACCACTTCCATTTGAATTCTCCCCTTCTCCACCTTCTAAATTATACAGCAGATCAAGGAGAAAACCGAAGGGCACTACAGAATAG 2139 0.424 MPSRPFPPTNPTKTKALFLALTISACVVIFCSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNGFDTANVIGKGGSGTVFRGILKDGKLIAIKRLDALSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRVLVYEYIPNRSLQESLFGDEGMSLSWESRLCIILDVARALEFLHLGCDPPVIHGDIKPSNVLIDSEWRGKISDFGLSRIKVEGEFGVDLFSQDLGRSQDLWKSQELSGNLTNLTAETPAIGTPIESISEVDFALALQASSSSKNSRTCFNVKALNLNSLNYNANIASETEIRSVNAKGKEISALDRDDWNGKFFPCDDELSSIDYSKELTVTASPLVDDEKANGKQWGKDWWWRQDGSGELCSKDYVMEWIGSQICPSNADWDDGKNNVHAKVELENSSPKDKDHDAIAPQSQVFGIGHNTTDNGVEKKESRGKKYHKKKHRKMQEWWKEEHLAELSKKTSKLKNLHTKWKKGLKVPHFDLGRRFYLCRRKKFGHEGENKCDQNGEFSFRRGWKKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQDGNILELVDERLKEDYNKEQASLCINLALICLQKIPELRPDIGDIVKILKGEMELPPLPFEFSPSPPSKLYSRSRRKPKGTTE* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0029 712 PANTHER OS08G0275200 PROTEIN 1 711 - -
Gso15g0029 712 Pfam Protein kinase domain 78 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0029 712 ProSiteProfiles Protein kinase domain profile. 76 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0029 712 MobiDBLite consensus disorder prediction 688 712 - -
Gso15g0029 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Gso15g0029 712 Gene3D Transferase(Phosphotransferase) domain 1 537 684 - -
Gso15g0029 712 Gene3D Transferase(Phosphotransferase) domain 1 152 262 - -
Gso15g0029 712 MobiDBLite consensus disorder prediction 440 466 - -
Gso15g0029 712 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Gso15g0029 712 SUPERFAMILY Protein kinase-like (PK-like) 56 698 IPR011009 -
Gso15g0029 712 PANTHER OS07G0586332 PROTEIN 1 711 IPR044576 -
Gso15g0029 712 SMART serkin_6 76 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0029 712 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Gso15g0029 712 Gene3D Phosphorylase Kinase; domain 1 43 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0029 Gso-Chr15 268103 271169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0029 546 678 Receptor kinase-like Gene Family AT3G58690 31.343 7.48e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gso15g0029 Pkinase 8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0029 - - gmx:100807432 1410.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0029 15 268103 271169 Gso11g3768 11 53302676 53305614 GST