Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0027 ATGCAACACCATGTAGCAGACGGAGCATCTGGTCTTCACTTTATCAATGCATGGTCAGATGTTGCCCGTGGCTTGGATATTTCCCTCCCCCCATTCATTGACAGGACACTACTCCGTGCCCGGGATCCACCTCATCCTGTTTTTGATCACATTGAATACAAGCCCCCACCAGCCATGAAGACTCCCCTGCAGCAGCAACTGCAATCCTCAAAACCAGTAGGCTCTGACAGTGCTGTGGCCGTCTCTACTGTCAAATTGACCCGTGACCAACTGAGCACCCTCAAGGGTAAGTCCAGAGAAGATGGCAACAGAATCAGCTACAGCTCTTATGAGATGTTGGCTGGTCATGTATGGAGAAGTGTGTGCAAGGCAAGAGCACTTCCTGATGACCAAGAAACCAAATTGTACATTGCAACTGATGGACGGGCAAGGCTGCAACCTCCCCTCACCCCTGGTTACTTTGGCAATGTCATCTTCACCACCACTCCTATAGCAGTGGCTGGTGATCTCATGTCAAAACCAACATGGTTTGCTGCTAGCAGAATCCATGACGCATTAATACGAATGGACAACGAATATTTGAGATCGGCTCTTGACTATCTAGAGCTGCAGCCTGATCTAAAAGTTCTTGTTCGTGGAGCACATACCTTTAGGTGTCCAAATCTTGGTATCACTAGCTGGGCAAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGACCCATTTTCATGGGACCTGGTGGGATTGCATACGAGGGACTATCTTTCATAATTCCAAGCTCAACAAATGATGGGAGCATGTCTGTGGCAATCGCTCTGCCCCCTGAGCAAATGAAAGTGTTTCAGGAATTGTTTTATGATATTTGA 870 0.4793 MQHHVADGASGLHFINAWSDVARGLDISLPPFIDRTLLRARDPPHPVFDHIEYKPPPAMKTPLQQQLQSSKPVGSDSAVAVSTVKLTRDQLSTLKGKSREDGNRISYSSYEMLAGHVWRSVCKARALPDDQETKLYIATDGRARLQPPLTPGYFGNVIFTTTPIAVAGDLMSKPTWFAASRIHDALIRMDNEYLRSALDYLELQPDLKVLVRGAHTFRCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSMSVAIALPPEQMKVFQELFYDI* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0027 289 Pfam Transferase family 1 287 - -
Gso15g0027 289 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 288 - -
Gso15g0027 289 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 1 288 - -
Gso15g0027 289 Gene3D - 73 289 IPR023213 -
Gso15g0027 289 Gene3D - 1 55 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0027 Gso-Chr15 248786 250032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0027 1 289 Monolignol Biosynthesis Gene Families AT5G48930 73.356 1.49e-159 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0027 K13065 - gmx:100801923 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0027 15 248786 250032 Gso11g3771 11 53320059 53325122 GST
Gso15g0027 15 248786 250032 Gso8g1833 8 17964088 17969391 PCT
Gso8g1833 8 17964088 17969391 Gso15g0027 15 248786 250032 PCT