Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0021 ATGGATAAAGTGTGTCTGAACAGTGAGGCTGTCCCTGTTGCTCCTGCCGTTGGAATGGAATTTGACAGCTACGATGATGTCTATTACTTCTATAATTGGTACGCCAAGGAACAGGGTTTTGGGGTTAGGGTCACTAATACCTGGTACCGCAAGACCAAGGAACGTTACAGAGCCAAACTTAGCTGCAGCAGTGCTGGCTTCAAGAAAAGAACTGAAGCCAATCGCCCCAGACCCGAAACCAGAACAGGTTGTCCTGCTATGATCAAGTTCAGGTTGATGGACTCCACTAGATGGAGAATTATTGAAGTTGAGCTTGACCACAATCACTTGATTAACCCCACCAGTGGAAAGTTTTACAAGTCTCATAAGCATATTCCTCTTGGGACCAAAAGAACCTTCCACTTAGACGACGACCATGACCACCACCACCACTTAGATGCAGCTGCTGCTCAACAGGTTCACAAAATTACCATGTTTCGAACTGTCATAGTCGATGCTCAGGATGAAGGGGAATCCCAAAACGCCCTCTATTCCAATCAGTTGAAGCTGAACAAAGGCGATTCTCAAGCCATTCTTAATTTTTTTAGTCACCAGCAATTGGCAGATCCACACTTCTTCTATGTGGTGGATGTCAATGAGAGGGGATGCTTGCGGAATTTGTTCTGGGCCGATGCAAAGTCCAGAGTGGCATACACTTATTTTGGTGATGTTGTAGCAATTGATACTGCGTGTTTGACAGCTGAATTTCAAGTTCCACTGGTTCTGTTCCTTGGGATAAACCACCATAAGCAATCCATCTTGTTTGGTTGTGGATTGCTTGCTGGTGACACCATTGAATCATATACATGGCTGTTCAGGGCGTGGCTTACGTGTATCTTAGGACGCCCCCCACAAGTTATCATTACCAACCAATGTGGAATCTTGCAAACTGTGGTTGCCGATGTCTTTCCAAGATCTACACACTGCCTTTGCTTGTTTAATATAATGCAAAAAATTCCAGAAAAACTGGGAGTCTGCATTGATTATGAAGCAACCAATGCAGCTTTGAGCAGAGCAGTTTATTCCTCTCTGATGGCCGAGGAATTTGAAGCAACTTGGGAGGACATGATGAAAAGCAATGAAACTAGAGACAATAAATGGCTTCAATCTTTATATGAAGATCGGAAACGGTGGGCTCCAGTTTATCTGAAGGAAATCTTCTTGGCAGGAATGCTTCCAATTCAACCAAGTGATGTTGCATCATTTTTCTTTGACGGGTACCTCAATGAACAAACTTCTCTAAAAGAATTTTTAGAAAAATATGATCAGATTTTACAGACAAAGCGACAACTTGAGGCTTTGGCAGATTTGGACTCAAAATCTTCTAGCTTTGAGCCAAAATCAAGGTCTTACTTTGTCTTGCAGGTTTCAAAGTTATACACCAATGAAATATTAAGAATGTTTGAAAGGGAAGTGGAAGGGATGTTTTCTTGCTTTAACTCCAGACAGATAAATGCTGATGGCCCAGTCGTCACATACATTGTCCAGGAACAAGTTGAAGTTGAGGGAAATCAGAGAGATGCAAGAGATTACAAGGTGTGTTATAATGAAGCTGAAATGGAGGTCCTTTGCATCTGTGGTTTGTTCAATTTCAGAGGTTACTTGTGTAGGCATGCTTTATTTATCTTAAGCCAAAATGGGATAAAAGAGATCCCAGCTCAGTACATTCTTTCACGATGGAGAAAAGATATGAAGCGTAGCAATGTTGATGATCACAACGGTGGTGGCATTCATATTAGTAATCCAGTTCATAGGTATGACCATTTATACAGACAGGTTGTGAAGGTTGTAGAGGAAGGTAAGAAATCTCATGATCATTACAGGACTGCGGTACATGCATTGGAGAATATATTGAGCAAGCTTCATCTTGTTAACGTTGAGGATCCCAATATAATGTACAAGTATTGA 1947 0.4176 MDKVCLNSEAVPVAPAVGMEFDSYDDVYYFYNWYAKEQGFGVRVTNTWYRKTKERYRAKLSCSSAGFKKRTEANRPRPETRTGCPAMIKFRLMDSTRWRIIEVELDHNHLINPTSGKFYKSHKHIPLGTKRTFHLDDDHDHHHHLDAAAAQQVHKITMFRTVIVDAQDEGESQNALYSNQLKLNKGDSQAILNFFSHQQLADPHFFYVVDVNERGCLRNLFWADAKSRVAYTYFGDVVAIDTACLTAEFQVPLVLFLGINHHKQSILFGCGLLAGDTIESYTWLFRAWLTCILGRPPQVIITNQCGILQTVVADVFPRSTHCLCLFNIMQKIPEKLGVCIDYEATNAALSRAVYSSLMAEEFEATWEDMMKSNETRDNKWLQSLYEDRKRWAPVYLKEIFLAGMLPIQPSDVASFFFDGYLNEQTSLKEFLEKYDQILQTKRQLEALADLDSKSSSFEPKSRSYFVLQVSKLYTNEILRMFEREVEGMFSCFNSRQINADGPVVTYIVQEQVEVEGNQRDARDYKVCYNEAEMEVLCICGLFNFRGYLCRHALFILSQNGIKEIPAQYILSRWRKDMKRSNVDDHNGGGIHISNPVHRYDHLYRQVVKVVEEGKKSHDHYRTAVHALENILSKLHLVNVEDPNIMYKY* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0021 648 Coils Coil 427 447 - -
Gso15g0021 648 Pfam FAR1 DNA-binding domain 30 112 IPR004330 -
Gso15g0021 648 SMART 26again6 535 562 IPR006564 GO:0008270
Gso15g0021 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 12 638 - -
Gso15g0021 648 Pfam MULE transposase domain 237 331 IPR018289 -
Gso15g0021 648 ProSiteProfiles Zinc finger SWIM-type profile. 524 560 IPR007527 GO:0008270
Gso15g0021 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 638 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0021 Gso-Chr15 214239 219569 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso15g0021 MULE 8.5e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0021 - K17604 gmx:100796267 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0021 15 214239 219569 Gso11g3777 11 53362369 53363106 GST