Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0018 ATGGACTCAACAACTGCAGTGTTGCTGATATTTGTTTCAGTTCTAGTGTGCTGCCACAGTACTGTTATCGTATCCAAGGATGGGAGTGGAAATTATACAACGGTGAGTGAAGCCATTATGAAAGCTCCGGACATGAGTGATAAGCCTTACACCATTCACGTTCGAGCCGGTACTTATGAAGAGTACGTAACCATTCCTGCTAAAAAGACTAATATTAAGCTCGTTGGAGATGGACCTCACCTCACCAAATTAGTTGGCTACCAAAATGGTTCCACCATAGGTAGGGTGTTGATTTCAGACGTACGAGGAGATGGGTTCATGGCAGAAAAGATGGGATTTGAGAACTGGGCAGGGCTGAAGGCAAGCGCGGCGGTGGCGGTTAGGAATGAGGCAAAGAAGAGTGTATTCTTCGAATGCTCAATCCAAGGAGTCCAAGACACACTTTGGGCGGTTTCGGGGAGTCAGTTCTACAAAAACTGCGACATCTACGGCACGGTGGACTTCATATACGGCAACGCAGCGGCAGTGTTCCAGGACTGCATGCTGTACGCGCGATACAGCGAGTACGTGACCTTCACCGCACAGTCGCGAGAGGATCCAAAGGAGAAGACTGGCTTCAGTTTCCAAAGATGCAAATTCACAATGTCCCCACAGGACTCGGCTAGAAAATCGAAGGTGCTTCGTGCAACGCTGGGGCGTCCTTTGAGAGCCTATTCCACAGTGGCCATTTTCCACTCTTACATCGACTCCATGCTCGATCCTAAAGGTTGGGAGCCCATGCCCCACCAGCCCACTGACAAAGTCACTTACATCGAGTTTCATAATTTTGGGCCGGGCTCCAAAACTGACCATAGGGTTGACTGGCCTGGTGTTAAGGTCCTTTCCCGCCCTACCCCATCCGCCCATTATTTCACTGCTTCCTATCTCTTGGATGCTGACTCTTGGATTCCCTCCACTGGCGTTCCCTTCGACAATCTACTCTAG 984 0.498 MDSTTAVLLIFVSVLVCCHSTVIVSKDGSGNYTTVSEAIMKAPDMSDKPYTIHVRAGTYEEYVTIPAKKTNIKLVGDGPHLTKLVGYQNGSTIGRVLISDVRGDGFMAEKMGFENWAGLKASAAVAVRNEAKKSVFFECSIQGVQDTLWAVSGSQFYKNCDIYGTVDFIYGNAAAVFQDCMLYARYSEYVTFTAQSREDPKEKTGFSFQRCKFTMSPQDSARKSKVLRATLGRPLRAYSTVAIFHSYIDSMLDPKGWEPMPHQPTDKVTYIEFHNFGPGSKTDHRVDWPGVKVLSRPTPSAHYFTASYLLDADSWIPSTGVPFDNLL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0018 327 PANTHER PECTINESTERASE 1 326 - -
Gso15g0018 327 Gene3D - 19 327 IPR012334 -
Gso15g0018 327 SUPERFAMILY Pectin lyase-like 18 324 IPR011050 -
Gso15g0018 327 Pfam Pectinesterase 22 312 IPR000070 GO:0030599|GO:0042545
Gso15g0018 327 PANTHER PECTINESTERASE 1 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0018 Gso-Chr15 196115 199128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0018 19 323 Carbohydrate Esterase AT3G05620 40.385 1.38e-74 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0018 K01051 - gmx:102665195 650.973