Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0017 ATGGCAGTTGTTGAAAGAAGGAGGGAATTGATATTCAGGTCGAAGCTTCCGGATATCTACATCCCCAAACACCTTCCCCTCCACACATACTGCTTCGAGAATTTGCCAGAGTACGGTGCACGCCCCTGCTTGATCAATGCCCCCACGGGAGACGTCTACAGCTACGAGGAGGTGGAAAGCACCGCCAGAAAGGTGGCGCGGGGGCTGAAGAAAGAGGGCGTGGAACAGGGCCAGGTCATCATGATCCTCCTCCCCAATTGCCCCGAATTCGTCTTCTCGTTTCTTGGCGCATCCCACCGCGGTGCCATGGCCACTGCTGCCAACCCTTTCTTCACCCCCGCCGAGATTGCAAAGCAAGCCCATGCCTCCAATGCCAAGCTCCTCATCACCCAGGCCTCTTACTACGACAAAGTCAAGGACCTCCGCCACATCAAGCTCGTATTCGTCGACTCTTGTCCCCCCCAGCATCTCCATTTCTCACAGCTGTGTGAGGATAATGGTGACGCTGATGTTGATATCAAGCCCGATGACGTGGTTGCATTGCCTTATTCTTCGGGAACAACTGGTCTTCCCAAGGGAGTGATGCTGAGCCACAAGGGGTTGGTGACCAGCATTGCTCAGCAGGTTGACGGTGATAATCCCAACCTCTATTACCACTGCCACGACACCATCCTCTGCGTGCTTCCCCTCTTTCACATTTACTCTCTCAACTCCGTTCTTCTCTGTGGCTTGCGTGCCAAGGCTACCATTCTCCTCATGCCCAAGTTCGATATTAACTCCTTGCTTGCTCTCATTCACAAGCACAAAGTCACTATTGCCCCTGTCGTCCCTCCCATTGCTCTCGCCATCTCCAAATCACCCGATCTCCACAAGTACGACCTGTCTTCCATCAGAGTCTTCAAGTCCGGGGGAGCCCCTCTCGGTAAGGAACTCGAAGACACTCTCAGAGCTAAATTCCCCAACGCCAAACTTGGCCAGGGATACGGAATGACTGAGGCAGGGCCTGTGCTAACAATGTCTTTAGCTTTTGCTAGAGAACCGATAGACGTAAAACCAGGTGCATGTGGAACCGTTGTAAGAAATGCAGAGTTGAAGATTGTCGATCCTGAAACCGGTCATTCTTTACCCAGAAACCACTCCGGCGAAATTTGCATACGAGGCGACCAGATTATGAAAGGTTATCTAAATGATGGAGAGGCTACAGAGAGAACCATAGACAAAGATGGTTGGTTGCACACAGGTGACATCGGTTACATCGACGATGACGATGAGTTATTCATCGTTGACAGGCTCAAGGAATTAATCAAATACAAAGGATTTCAAGTGGCTCCAGCTGAACTTGAAGCCCTTCTTCTCACTCATCCTAAGATCTCTGATGCTGCTGTTGTTCCAATGAAGGATGAAGCCGCGGGAGAGGTACCTGTTGCATTTGTGGTCATATCAAATGGTTATACCGACACAACCCAGGATGAAATTAAGCAGTTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAACCGAGTATTCTTCATTGATGCAATTCCCAAGTCACCGTCAGGCAAAATCTTGCGCAAGGATCTAAGAGCAAAGCTAACAGCAACTGTTCCAACATGA 1617 0.4991 MAVVERRRELIFRSKLPDIYIPKHLPLHTYCFENLPEYGARPCLINAPTGDVYSYEEVESTARKVARGLKKEGVEQGQVIMILLPNCPEFVFSFLGASHRGAMATAANPFFTPAEIAKQAHASNAKLLITQASYYDKVKDLRHIKLVFVDSCPPQHLHFSQLCEDNGDADVDIKPDDVVALPYSSGTTGLPKGVMLSHKGLVTSIAQQVDGDNPNLYYHCHDTILCVLPLFHIYSLNSVLLCGLRAKATILLMPKFDINSLLALIHKHKVTIAPVVPPIALAISKSPDLHKYDLSSIRVFKSGGAPLGKELEDTLRAKFPNAKLGQGYGMTEAGPVLTMSLAFAREPIDVKPGACGTVVRNAELKIVDPETGHSLPRNHSGEICIRGDQIMKGYLNDGEATERTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPKISDAAVVPMKDEAAGEVPVAFVVISNGYTDTTQDEIKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLTATVPT* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0017 538 SUPERFAMILY Acetyl-CoA synthetase-like 12 533 - -
Gso15g0017 538 Pfam AMP-binding enzyme 37 437 IPR000873 -
Gso15g0017 538 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 534 - -
Gso15g0017 538 ProSitePatterns Putative AMP-binding domain signature. 181 192 IPR020845 -
Gso15g0017 538 Gene3D - 5 431 IPR042099 -
Gso15g0017 538 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 534 - -
Gso15g0017 538 Gene3D - 432 535 IPR045851 -
Gso15g0017 538 Pfam AMP-binding enzyme C-terminal domain 446 522 IPR025110 -
Gso15g0017 538 CDD 4CL 21 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0017 Gso-Chr15 191363 194661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0017 6 500 Monolignol Biosynthesis Gene Families AT1G51680 68.898 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0017 K01904 - gmx:100819192 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0017 15 191363 194661 Gso11g3781 11 53393907 53397021 GST