Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0015 ATGTCCATGATTTGGATTGTTTTCTTTTCCTTGTCTTGTGCTGTTGTTTCTTCACTCACCTCCGATGGGGTGACTCTCTTGTCACTCTTGAGGCACTGGACATCCGTGCCTCCTTCCATAAACGCCACCTGGCTTGCCTCCGATACCACTCCATGCTCCTCCTGGGTAGGAGTACAATGTGACCATTCCCACCATGTCGTCAACCTTACCCTCCCAGATTATGGTATTGCCGGTCAATTAGGACCTGAAATTGGAAATTTAAGTCGCCTAGAGTACTTAGAACTTGCTAGCAACAACCTTACTGGTCAAATACCTGACGCCTTCAAAAACATGCACAACCTCAATTTACTCAGCCTTCCATATAATCAACTGTCTGGTGAAATTCCAGATTCCTTGACTCATGCTCCCCAACTAAATCTTGTTGATCTTTCTCATAACACTTTAAGTGGATCCATCCCCACAAGTATTGGGAACATGACTCAGCTCTTGCAGTTGTATCTTCAGAGTAACCAGTTGTCTGGGACAATTCCCTCATCCATTGGGAACTGCAGCAAATTACAAGAATTGTTTTTGGATAAAAATCACTTGGAGGGTATCCTGCCTCAGAGTCTTAACAATCTCAATGATCTTGCTTATTTTGATGTTGCCAGCAATAGACTTAAGGGTACCATTCCTTTTGGTTCTGCTGCCAGTTGTAAAAATTTGAAGAATTTGGATCTCTCATTCAATGACTTTAGTGGAGGCCTTCCCTCAAGCTTGGGGAACTGTAGCGCTTTATCTGAATTTTCTGCCGTGAACTGCAATTTGGATGGCAATATTCCTCCCTCCTTTGGTCTACTGACCAAGCTTTCTATTCTATACCTTCCCGAGAACCACTTATCTGGAAAAGTACCTCCAGAAATTGGCAACTGCATGTCTTTGACAGAGTTACATCTGTATTCCAATCAACTTGAGGGAAACATTCCAAGTGAACTGGGAAAACTTAGAAAACTAGTGGATCTTGAATTGTTTTCAAATCAATTGACGGGTGAAATTCCACTCAGCATCTGGAAGATTAAATCTCTGAAGCATCTCCTTGTGTATAATAACAGTCTTTCTGGGGAACTTCCTTTGGAGATGACAGAGCTCAAGCAACTGAAAAACATCTCATTGTTTAGCAACCAGTTCTCCGGAGTCATACCGCAAAGCTTGGGAATTAACAGCAGTTTAGTTCTTTTGGATTTTACAAATAATAAATTCACTGGCAACATCCCACCAAATCTGTGTTTTGGCAAGAAATTAAACATCCTGAATTTGGGCATCAACCAACTTCAAGGCAGCATTCCTCCTGATGTTGGGAGATGTACAACCCTTAGAAGGTTAATTCTTCAACAAAATAACTTTACTGGGCCTCTTCCTGATTTCAAAAGCAATCCAAATCTCGAACATATGGATATCAGCAGCAACAAAATCCATGGTGAAATTCCATCAAGTTTGCGAAATTGCAGACATATCACTCACCTAATTTTGTCCATGAACAAATTTAATGGGCCTATACCCTCAGAGCTAGGGAACATTGTCAATCTTCAAACTTTGAATCTCGCTCACAACAACTTAGAAGGTCCTTTGCCCTCTCAGCTGTCAAAGTGTACCAAAATGGACAGGTTTGATGTTGGATTTAATTTCCTAAATGGTTCATTGCCATCAGGTCTGCAGAGCTGGACAAGGCTAACCACATTAATTTTGAGTGAGAATCACTTTAGTGGGGGCCTCCCAGCTTTCTTGTCGGAATATAAAATGCTTTCTGAACTACAACTTGGTGGCAATATGTTTGGTGGCAGAATTCCTAGATCGGTTGGAGCATTGCAGAGTTTGAGGTATGGTATGAATCTGAGTTCAAATGGGCTGATAGGAGACATTCCTGTTGAGATTGGAAACTTGAACTTTTTGGAAAGACTGGATCTGTCTCAGAACAATTTGACCGGAAGCATAGAAGTTCTTGGTGAACTCCTCTCCTTAGTTGAAGTCAATATTTCATACAATTCTTTTCATGGTCGTGTACCAAAGAAGCTAATGAAATTGCTCAAGTCTCCCTTGTCATCATTTTTGGGCAATCCTGGCCTATGTACCACCACCAGGTGTTCAGCATCTGATGGCTTGGCTTGCACTGCAAGAAGCTCTATAAAACCATGTGATGACAAATCTACTAAACAGAAAGGCCTCAGTAAAGTTGAAATTGTGATGATAGCTCTCGGGTCCTCAATACTTGTTGTTTTGCTGTTGCTGGGATTAGTTTATATTTTTTATTTTGGAAGAAAAGCTTACCAGGAAGTCCATATCTTTGCTGAAGGGGGTTCTTCTTCCCTTCTTAACGAAGTCATGGAGGCTACAGCAAACCTAAATGATCGGTATATTATTGGCAGAGGAGCCTATGGAGTTGTTTATAAAGCCCTGGTGGGTCCAGACAAAGCCTTTGCTGCGAAGAAGATAGGATTTGCTGCGAGCAAAGGTAAGAACTTGAGCATGGCCAGAGAAATTGAAACCCTTGGGAAAATTCGGCATCGAAATCTGGTCAAATTGGAAGACTTTTGGTTGAGAGAAGATTATGGTATAATTTTGTACAGCTACATGGCAAATGGAAGTCTTCATGATGTTTTGCACGAAAAGACACCACCACTAACCTTAGAGTGGAATGTCCGGAATAAGATAGCTGTTGGAATTGCTCATGGATTGGCTTATCTCCATTATGACTGTGATCCTCCCATAGTGCACCGAGACATCAAGCCAAGCAATATACTTCTAGACTCTGATATGGAGCCTCACATTGCTGACTTTGGTATTGCCAAACTTCTGGATCAGTCTTCTGCTTCAAATCCTTCCATTTCTGTTCCGGGTACAATTGGCTATATTGCACCAGAGAATGCTTATACAACAACAAATAGTAGGGAGTCTGATGTATACAGTTACGGGGTAGTTTTGCTTGAGCTGATAACCAGAAAGAAGGCAGCAGAATCAGATCCTTCCTTCATGGAGGGTACTATAGTAGTGGATTGGGTTAGGTCTGTGTGGAGGGAAACAGGAGACATTAATCAAATTGTTGATTCAAGCCTTGCAGAGGAATTTCTAGATATCCATATAATGGAAAATATTACCAAAGTGCTTATGGTGGCTCTGAGATGTACTGAGAAGGATCCACACAAGAGACCCACAATGAGAGATGTTACCAAGCAGTTAGCAGATGCTAATCCACGGGCAAGAAGTACAAAGGGCTAG 3252 0.4164 MSMIWIVFFSLSCAVVSSLTSDGVTLLSLLRHWTSVPPSINATWLASDTTPCSSWVGVQCDHSHHVVNLTLPDYGIAGQLGPEIGNLSRLEYLELASNNLTGQIPDAFKNMHNLNLLSLPYNQLSGEIPDSLTHAPQLNLVDLSHNTLSGSIPTSIGNMTQLLQLYLQSNQLSGTIPSSIGNCSKLQELFLDKNHLEGILPQSLNNLNDLAYFDVASNRLKGTIPFGSAASCKNLKNLDLSFNDFSGGLPSSLGNCSALSEFSAVNCNLDGNIPPSFGLLTKLSILYLPENHLSGKVPPEIGNCMSLTELHLYSNQLEGNIPSELGKLRKLVDLELFSNQLTGEIPLSIWKIKSLKHLLVYNNSLSGELPLEMTELKQLKNISLFSNQFSGVIPQSLGINSSLVLLDFTNNKFTGNIPPNLCFGKKLNILNLGINQLQGSIPPDVGRCTTLRRLILQQNNFTGPLPDFKSNPNLEHMDISSNKIHGEIPSSLRNCRHITHLILSMNKFNGPIPSELGNIVNLQTLNLAHNNLEGPLPSQLSKCTKMDRFDVGFNFLNGSLPSGLQSWTRLTTLILSENHFSGGLPAFLSEYKMLSELQLGGNMFGGRIPRSVGALQSLRYGMNLSSNGLIGDIPVEIGNLNFLERLDLSQNNLTGSIEVLGELLSLVEVNISYNSFHGRVPKKLMKLLKSPLSSFLGNPGLCTTTRCSASDGLACTARSSIKPCDDKSTKQKGLSKVEIVMIALGSSILVVLLLLGLVYIFYFGRKAYQEVHIFAEGGSSSLLNEVMEATANLNDRYIIGRGAYGVVYKALVGPDKAFAAKKIGFAASKGKNLSMAREIETLGKIRHRNLVKLEDFWLREDYGIILYSYMANGSLHDVLHEKTPPLTLEWNVRNKIAVGIAHGLAYLHYDCDPPIVHRDIKPSNILLDSDMEPHIADFGIAKLLDQSSASNPSISVPGTIGYIAPENAYTTTNSRESDVYSYGVVLLELITRKKAAESDPSFMEGTIVVDWVRSVWRETGDINQIVDSSLAEEFLDIHIMENITKVLMVALRCTEKDPHKRPTMRDVTKQLADANPRARSTKG* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0015 1083 Gene3D Transferase(Phosphotransferase) domain 1 870 1082 - -
Gso15g0015 1083 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 83 1069 - -
Gso15g0015 1083 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 88 - -
Gso15g0015 1083 SMART serkin_6 793 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0015 1083 ProSitePatterns Serine/Threonine protein kinases active-site signature. 915 927 IPR008271 GO:0004672|GO:0006468
Gso15g0015 1083 Gene3D Ribonuclease Inhibitor 298 398 IPR032675 -
Gso15g0015 1083 Gene3D Ribonuclease Inhibitor 399 710 IPR032675 -
Gso15g0015 1083 MobiDBLite consensus disorder prediction 1058 1083 - -
Gso15g0015 1083 ProSitePatterns Protein kinases ATP-binding region signature. 799 822 IPR017441 GO:0005524
Gso15g0015 1083 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Gso15g0015 1083 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 88 - -
Gso15g0015 1083 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 83 1069 - -
Gso15g0015 1083 ProSiteProfiles Leucine-rich repeat profile. 642 664 IPR001611 GO:0005515
Gso15g0015 1083 ProSiteProfiles Protein kinase domain profile. 793 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0015 1083 SUPERFAMILY RNI-like 381 693 - -
Gso15g0015 1083 Gene3D Phosphorylase Kinase; domain 1 762 869 - -
Gso15g0015 1083 Gene3D Ribonuclease Inhibitor 24 133 IPR032675 -
Gso15g0015 1083 Gene3D Ribonuclease Inhibitor 134 228 IPR032675 -
Gso15g0015 1083 Gene3D Ribonuclease Inhibitor 229 297 IPR032675 -
Gso15g0015 1083 Pfam Protein kinase domain 798 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0015 1083 SUPERFAMILY Protein kinase-like (PK-like) 779 1071 IPR011009 -
Gso15g0015 1083 SUPERFAMILY RNI-like 68 421 - -
Gso15g0015 1083 SMART LRR_typ_2 280 304 IPR003591 -
Gso15g0015 1083 SMART LRR_typ_2 519 543 IPR003591 -
Gso15g0015 1083 SMART LRR_typ_2 87 110 IPR003591 -
Gso15g0015 1083 SMART LRR_typ_2 159 183 IPR003591 -
Gso15g0015 1083 SMART LRR_typ_2 640 663 IPR003591 -
Gso15g0015 1083 SMART LRR_typ_2 184 206 IPR003591 -
Gso15g0015 1083 Pfam Leucine rich repeat 185 245 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0015 Gso-Chr15 167261 171244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0015 16 1080 Receptor kinase-like Gene Family AT1G73080 51.862 0.0 1031
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso15g0015 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0015 - - gmx:100778035 2102.79