Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0008 ATGTTGGTTAAAATTCACACAAATTGGTTTGCCCCATTTGCGTTCCCAGTCCGACTGGCACACAAGATTGAGGGTTGTTTTGAGTTGAGTAAGTACGTGTTATTCACGCGTCCTCCCATATCTTCATCATTTGAAGTGGATAACGATAAAGCAAGAAAAAGAAGATCAAGTTGGCGTTGTGGTTGTGGTTCGGAGGAAGCTCGTAGGGCCGTTTCAAGTTACCTTGGAGAATTGGGGGTGTCGGAGGAGGATTCGGTGTGGATCTCGTCAAAGTCACCGGAGTACGTGAAGATGTTGGTGGAAGGTGTGAGGGATTTGGAGCAGTGGCAAATTGCGCTTGCTGGGTTGAGCTTCAAGGACAAGATTCTTCATATCGCCGCTCAAAAAGGGGACAAGGGCAAAGTTGCCTACTTAGAGAGTCTGGGCTTTACTCTCTCTTCCTCCATGAACATTGCCAGATATCTCCCCTCTGACACTCACACTCTTCCATCTCTCATGCACAAGGTTACTCGTATCAAGCAACTCTTGTTCTTTTCTCCCACTCCCGACCATCACTTGCTTATCAAAAGCATTCGCCTCATGATGCGCCACCTCTCCATTTCAATTGATGAAGACCTTCAACACACTCTGTCCTTTTTCGAAAAGCTCCAAGCAAAGCCTGGTGGTCTTGGCATTTTGGCTTACAAGAATGCCGCTTTCCGTTCCTTAATCGAATCATTTCCTCGTCTACTTCAGTTATCAGTGGACAACCACTTCACACCCATACTCCATTTTCTCCACAATTTTGGAATCCCCACATTTCGCATCTCAAACATAATACTGGCTTTTCCTCCTCTTCTCTTCTGGGATCTTCAACTCCTTCAAACTAGACTCCTCGTCTTCAAGGAGATTGACCTGCCTGATAAAGATTATGCTAAGCTGTTGCTAAAATATCCTTGGCTTCTATCTACAAGTATTCAAGAAAACTATACGGAGCTCCTTGCCTTTTCATATTCTATCAAGGTTCCAAAGACACAGATAGACCGTGCAATTGAAAGCCACCCTCATCTATTGAGTTGTTCAACTAGCAAGCTGAAGTCAATGGTGGATCAGTTTGCTGAACTAGGAGTTCGAAACAAAAAGTTAAATCAGGTTATTGCTAAAAGTCCTCAACTACTATTGCGGAAGCCCAAAGACTTTCTACAGATTGTTCTATTGTTTGAAAATATGGGTTTTGATAAAGAAACCATCGGAAGAATACTTGCTCGCTGCCCTGAAATTTTTGCTGCCAGTATTAATAAAACTCTACAAAGGAAGATTGAGTTCCTTGGTAGAGTTGGTGTTTCTAAAACTTTCCTTCCTGGGGTTATCAGAAAGTATCCAGAATTACTTGTTTCTGACATTGACAAAACTTTGCTACAAAGGATAATGTACTTGATGAAGTTAGGTCTTTCAGAGAAAGACATTGCATATATGGTACGTACATTTTCTCCTCTCCTTGGGTATAGTATAGAGGGGGTTCTTAGGCCAAAAATAGAATTCCTTGTGAACTCAATGGAGAGGCCAGTAAGAGATGTGGTGGATTACCCTAGGTATTTTAGCTATTCACTAGAGAAGAAGATAAAGCCAAGATATTGGGTGTTGAAAGGAAGGGATATCAAATGCAGCTTAAAGGATATGCTGGGAAAAAACGATGAAGAATTTGCTGCTGAGTTTATGGGTATTGGAAGGATGCTCGTCTATCCTCCTGTGTCGTCTAATGATAGCCAGTAA 1752 0.4229 MLVKIHTNWFAPFAFPVRLAHKIEGCFELSKYVLFTRPPISSSFEVDNDKARKRRSSWRCGCGSEEARRAVSSYLGELGVSEEDSVWISSKSPEYVKMLVEGVRDLEQWQIALAGLSFKDKILHIAAQKGDKGKVAYLESLGFTLSSSMNIARYLPSDTHTLPSLMHKVTRIKQLLFFSPTPDHHLLIKSIRLMMRHLSISIDEDLQHTLSFFEKLQAKPGGLGILAYKNAAFRSLIESFPRLLQLSVDNHFTPILHFLHNFGIPTFRISNIILAFPPLLFWDLQLLQTRLLVFKEIDLPDKDYAKLLLKYPWLLSTSIQENYTELLAFSYSIKVPKTQIDRAIESHPHLLSCSTSKLKSMVDQFAELGVRNKKLNQVIAKSPQLLLRKPKDFLQIVLLFENMGFDKETIGRILARCPEIFAASINKTLQRKIEFLGRVGVSKTFLPGVIRKYPELLVSDIDKTLLQRIMYLMKLGLSEKDIAYMVRTFSPLLGYSIEGVLRPKIEFLVNSMERPVRDVVDYPRYFSYSLEKKIKPRYWVLKGRDIKCSLKDMLGKNDEEFAAEFMGIGRMLVYPPVSSNDSQ* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0008 583 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 109 575 - -
Gso15g0008 583 PANTHER CGI-12 PROTEIN-RELATED 109 575 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 Pfam mTERF 256 562 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 Gene3D Transcription termination factor 3, mitochondrial 354 569 IPR038538 -
Gso15g0008 583 SMART mt_12 270 300 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 SMART mt_12 447 478 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 SMART mt_12 341 371 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 SMART mt_12 376 406 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 SMART mt_12 483 515 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 SMART mt_12 411 442 IPR003690 GO:0003690|GO:0006355
Gso15g0008 583 SMART mt_12 516 547 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0008 Gso-Chr15 77490 81408 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso15g0008 mTERF 4.3e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0008 K15032 - gmx:100802127 1156.35