Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0007 ATGGCTAGCAGGTTACGCTATTTGCTTTTAAAAATTCTAGATGAAGTAGTAGAAGCTGATATGAGGAGGCTGAAGCTTGAGTTAACGCAAAGGATGGAAATGTACAGTACAGCATGCAAAGAAGCATATATATCACAGCAGAGGTTTATGGAGTTGACCCACCAGAGACTTGAGGAAGAAAAAAAAATAGATGAGGCACGATTGGCTCAGGAAGCTGCAATGGCAATTGCTGAGAAAGAGAAAGCAAGATGTAGAGCAGCCATGGAAACTGCTGAAGCATCTAAGAAAATTGCAGAGGTGGAAACACATAGAAGAGCGAGTGTTGAAGTTAAAGCTCTTAAAGAAGCAGAGGAAATGAGGAAGCTATTGGAAAATCTAGCCCAAACTGATGTGAGATATAGGAGATACTGTATAGAGGAGATTGAAACAGCCACAAACTTCTTTTCTGAATCCCAGAGAATCGGGGAAGGAGGTTATGGCCTTGTTTATAAATGTTACCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGATTGACATACTGAGCTGCATGCGACACCCAAACATGGTGCTTCTTCTAGGAGCGTGTCCGGAGTATGGAATATTGATTTATGAATATATGGCTAATGGAAGCTTAGAAGATTGTCTGTTTCAAAAAAAGAACAAGAGTGTTCTGTCTTGGCAGCTGAGGTTCCGAATTGCTGCAGAGATAGGGACGGGATTACTATTCCTGCATCAGACCAAGCCTGAACCTTTAGTGCACCGTGATCTGAAACCAGGCAACATTTTGCTAGACCAGAATTATGTGAGTAAGATAAGCGATGTTGGATTGGCAAGGCTTGTCCCAGCTGTAGCTGAAAATGTAACACAATGCTGCATGACATCAGCAGCTGGAACACTTTGTTATATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGTGTGAAGTCAGATGTTTATTCTCTAGGGATCATATTTCTTCAATTATTGACAGGCAGGCCTCCAATGGGACTGGCTCACCTTGCTGGAGAGTCTATCGAGAAGGACACCTTCGTCGAAATGCTGGATCCATCTGTCACCGGGTGGCCTCTTGAACAAGCCTTGTGCCTTGCAAAAATAGCAGTCAAGTGTGCTGAACTTAGGCGAAAAGATAGGCCAGACCTCGCCAAACTAGTGTTGCCAGAGCTAGATAAATTGAGAGACTTTGCCGAACAAAACATGAACATGCCTATCTTTTTAGGATGCACTGCATCTTCACCCAGCCACAGTGAAGCTTTCGTGCATCAGGATGTGATCAGCGACTTGCGGCTTGTACATTCGGAAAGCTCATCGGCTCCATCAACGCCCACAGAAGGAAAACCTTAA 1407 0.4399 MASRLRYLLLKILDEVVEADMRRLKLELTQRMEMYSTACKEAYISQQRFMELTHQRLEEEKKIDEARLAQEAAMAIAEKEKARCRAAMETAEASKKIAEVETHRRASVEVKALKEAEEMRKLLENLAQTDVRYRRYCIEEIETATNFFSESQRIGEGGYGLVYKCYLDHTPVAVKVLRPDAAQGKSQFQQEIDILSCMRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFQKKNKSVLSWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAENVTQCCMTSAAGTLCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRPPMGLAHLAGESIEKDTFVEMLDPSVTGWPLEQALCLAKIAVKCAELRRKDRPDLAKLVLPELDKLRDFAEQNMNMPIFLGCTASSPSHSEAFVHQDVISDLRLVHSESSSAPSTPTEGKP* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0007 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Gso15g0007 468 Gene3D Transferase(Phosphotransferase) domain 1 221 425 - -
Gso15g0007 468 Gene3D Phosphorylase Kinase; domain 1 125 220 - -
Gso15g0007 468 SMART serkin_6 148 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0007 468 PANTHER BNAA05G18880D PROTEIN 14 450 - -
Gso15g0007 468 ProSiteProfiles Protein kinase domain profile. 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0007 468 PANTHER OS02G0152300 PROTEIN 14 450 - -
Gso15g0007 468 ProSitePatterns Protein kinases ATP-binding region signature. 154 175 IPR017441 GO:0005524
Gso15g0007 468 Coils Coil 74 94 - -
Gso15g0007 468 Coils Coil 109 129 - -
Gso15g0007 468 SUPERFAMILY Protein kinase-like (PK-like) 131 406 IPR011009 -
Gso15g0007 468 Pfam Protein kinase domain 149 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0007 Gso-Chr15 72046 74311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0007 13 441 Receptor kinase-like Gene Family AT1G78940 63.403 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso15g0007 Pkinase 3.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0007 - - gmx:100801601 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0007 15 72046 74311 Gso11g3790 11 53505420 53508871 GST