Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso15g0007 | ATGGCTAGCAGGTTACGCTATTTGCTTTTAAAAATTCTAGATGAAGTAGTAGAAGCTGATATGAGGAGGCTGAAGCTTGAGTTAACGCAAAGGATGGAAATGTACAGTACAGCATGCAAAGAAGCATATATATCACAGCAGAGGTTTATGGAGTTGACCCACCAGAGACTTGAGGAAGAAAAAAAAATAGATGAGGCACGATTGGCTCAGGAAGCTGCAATGGCAATTGCTGAGAAAGAGAAAGCAAGATGTAGAGCAGCCATGGAAACTGCTGAAGCATCTAAGAAAATTGCAGAGGTGGAAACACATAGAAGAGCGAGTGTTGAAGTTAAAGCTCTTAAAGAAGCAGAGGAAATGAGGAAGCTATTGGAAAATCTAGCCCAAACTGATGTGAGATATAGGAGATACTGTATAGAGGAGATTGAAACAGCCACAAACTTCTTTTCTGAATCCCAGAGAATCGGGGAAGGAGGTTATGGCCTTGTTTATAAATGTTACCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGATTGACATACTGAGCTGCATGCGACACCCAAACATGGTGCTTCTTCTAGGAGCGTGTCCGGAGTATGGAATATTGATTTATGAATATATGGCTAATGGAAGCTTAGAAGATTGTCTGTTTCAAAAAAAGAACAAGAGTGTTCTGTCTTGGCAGCTGAGGTTCCGAATTGCTGCAGAGATAGGGACGGGATTACTATTCCTGCATCAGACCAAGCCTGAACCTTTAGTGCACCGTGATCTGAAACCAGGCAACATTTTGCTAGACCAGAATTATGTGAGTAAGATAAGCGATGTTGGATTGGCAAGGCTTGTCCCAGCTGTAGCTGAAAATGTAACACAATGCTGCATGACATCAGCAGCTGGAACACTTTGTTATATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGTGTGAAGTCAGATGTTTATTCTCTAGGGATCATATTTCTTCAATTATTGACAGGCAGGCCTCCAATGGGACTGGCTCACCTTGCTGGAGAGTCTATCGAGAAGGACACCTTCGTCGAAATGCTGGATCCATCTGTCACCGGGTGGCCTCTTGAACAAGCCTTGTGCCTTGCAAAAATAGCAGTCAAGTGTGCTGAACTTAGGCGAAAAGATAGGCCAGACCTCGCCAAACTAGTGTTGCCAGAGCTAGATAAATTGAGAGACTTTGCCGAACAAAACATGAACATGCCTATCTTTTTAGGATGCACTGCATCTTCACCCAGCCACAGTGAAGCTTTCGTGCATCAGGATGTGATCAGCGACTTGCGGCTTGTACATTCGGAAAGCTCATCGGCTCCATCAACGCCCACAGAAGGAAAACCTTAA | 1407 | 0.4399 | MASRLRYLLLKILDEVVEADMRRLKLELTQRMEMYSTACKEAYISQQRFMELTHQRLEEEKKIDEARLAQEAAMAIAEKEKARCRAAMETAEASKKIAEVETHRRASVEVKALKEAEEMRKLLENLAQTDVRYRRYCIEEIETATNFFSESQRIGEGGYGLVYKCYLDHTPVAVKVLRPDAAQGKSQFQQEIDILSCMRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFQKKNKSVLSWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAENVTQCCMTSAAGTLCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRPPMGLAHLAGESIEKDTFVEMLDPSVTGWPLEQALCLAKIAVKCAELRRKDRPDLAKLVLPELDKLRDFAEQNMNMPIFLGCTASSPSHSEAFVHQDVISDLRLVHSESSSAPSTPTEGKP* | 469 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso15g0007 | 468 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 266 | 278 | IPR008271 | GO:0004672|GO:0006468 | |
Gso15g0007 | 468 | Gene3D | Transferase(Phosphotransferase) domain 1 | 221 | 425 | - | - | |
Gso15g0007 | 468 | Gene3D | Phosphorylase Kinase; domain 1 | 125 | 220 | - | - | |
Gso15g0007 | 468 | SMART | serkin_6 | 148 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso15g0007 | 468 | PANTHER | BNAA05G18880D PROTEIN | 14 | 450 | - | - | |
Gso15g0007 | 468 | ProSiteProfiles | Protein kinase domain profile. | 148 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso15g0007 | 468 | PANTHER | OS02G0152300 PROTEIN | 14 | 450 | - | - | |
Gso15g0007 | 468 | ProSitePatterns | Protein kinases ATP-binding region signature. | 154 | 175 | IPR017441 | GO:0005524 | |
Gso15g0007 | 468 | Coils | Coil | 74 | 94 | - | - | |
Gso15g0007 | 468 | Coils | Coil | 109 | 129 | - | - | |
Gso15g0007 | 468 | SUPERFAMILY | Protein kinase-like (PK-like) | 131 | 406 | IPR011009 | - | |
Gso15g0007 | 468 | Pfam | Protein kinase domain | 149 | 355 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso15g0007 | Gso-Chr15 | 72046 | 74311 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso15g0007 | 13 | 441 | Receptor kinase-like Gene Family | AT1G78940 | 63.403 | 0.0 | 546 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Gso15g0007 | Pkinase | 3.4e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso15g0007 | - | - | gmx:100801601 | 873.233 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso15g0007 | 15 | 72046 | 74311 | Gso11g3790 | 11 | 53505420 | 53508871 | GST |