Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0005 ATGGTAATGGGCGCGCGCTCTGCTTCGCTCGAGCGCGCACCATCAAATAATGTCGTCAAGTTGTGGTTCACCTTAATATTAATATCATGTTCGTGCACATCAGCGATGTCTTCAGATGCTGAGGCACTGTTGAAGTTCCGGGATTCTTTGAGAAATGTGATAGCCCTTAGTAGTTGGGACCCATCCATAAACCGAAAGCCACCGTGCTCTGGCAACATCCCCAACTGGGTGGGCCTGTTTTGTATGAATGACAAGGTTTGGGGGTTGCGGCTTGAGAACATGGGCCTAACAGGCAACATCGACGTAAAGTCTCTGGGTTCAATCCCCGCTCTCCGAACGGTTAGCCTAATGAACAATACCTTTGTGGGTCCCTTGCCTGACGTGAAGATGCTACCAAATCTCAAGGCCCTCTACTTGTCCTATAATCATTTCTCCGGACAGATACCGGATGATGCGTTTACGGGTTTGAATAGATTGAGGAAACTGTATATGTCCAACAACGAGTTCACAGGTCAAATTCCTTCCTCTCTTGCCACCTTGCCCAGTCTCCTCATCCTCAGGCTCGACTCAAACAAGTTTCAAGGTCAAATCCCCCAATTTCAACGCAATAAAAGTTTGAAGATTATCAACCTGTCTAACAATGACTTAGAGGGGCCCATCCCGGCCAATCTAAGCACCTTCGACGCCTCCTCATTTAGCGGAAACCCGGGACTATGCGGGCCGCCCCTGACCAACGAGTACTGCCAAAGGGGAGCCCCAGAGGCGTCCAAAATGCGCCTTCTAAAAATTTTACTTGCTGTGATCGCCATAGCATTGATAATAGCCATCATCCTGGTTGCAGTCCTATTGGTGATATGTCGGTTGAGGTCACAGAAACATCATACGTTGCAGGGCCAAGCCTCCCAAAATTACGCTCCTCCCATTTATGTCAAAACTAAAAGCCTAGCTGATCACTATGCTGCTAGTCCCAGGCTGGTTTCATCATCAGATCGCGGTGGCCATGGACATTCCAGGAGGGGGGAACAAGCTGGCAAACTGACATTCCTCAGCCATCACCAACCCAAGTTTGATTTGCAGGATTTGCTAAAGGCCTCCGCCGAAATTTTAGGAAGTGCCGGTTTTGGGTCTTCCTACAAGGCCGTTGTTTTGGACGGTCAAGCCGTGGTTGTCAAGAGGTACAAGCACATGAACAATGTGCCAAGAGATGAGTTCCACGAGCACATGAGAAGGCTGGGCAACCTCAACCATCCCAATCTTCTCCCTCTTCTCGCCTATTATTATCGAAAAGATGAAAAGTTTTTACTCACTTCCTTTGTTGACAACGGTTGCTTGGCCAGCCATCTTCATGGTAATCGTGACTATCAAAGGCCAGGACTTGATTGGCCCACTCGCTTGAAAATCGTGAAAGGTGTAGCCAGGGGTTTGGCTCACCTATACAGTTCCCTCCCAAGCGTGATTGTGCCTCACGGTCATATCAAATCTTCCAACGTGCTTTTGGATGAATCCTTCGAGCCCCTACTCACTGATTATGCCCTCAGTCCCGTCATCAACCTTGACCATGCCCAACAAATCATCATGCCTTACAAATCTCCCGAGTATGCTCAACTTGGTCGCATTACAAAGAAGACTGATGTGTGGAGTTTTGGAATTCTGATACTGGAGATCTTGACCGGCAAATTCCCAGAAAACTATCTCACACTTAGGCATAATACTGATTCTGACATAGCCAGTTGGGTAAATACCATGATTACTGAGAAGCGCACCACTGACGTGTTTGACGTAGAGATGGGAGGAATCGGAAATAGTAAAGCTGAATTGCTCAAACTTTTAAAGATTGGCTTAAGCTGTTGTGAGGAGAATGTGGAAAGAAGGCTAGATATCAAGGAAGCTCTTGAGCAAGTTGAAGACTTGAAAGAGACTGAAAATGATGCCATTATTGGAGAATACTCCTCCACTCTCATCACCACCGAAAGAAATGCTTATATAGCTGTGTGA 1995 0.4717 MVMGARSASLERAPSNNVVKLWFTLILISCSCTSAMSSDAEALLKFRDSLRNVIALSSWDPSINRKPPCSGNIPNWVGLFCMNDKVWGLRLENMGLTGNIDVKSLGSIPALRTVSLMNNTFVGPLPDVKMLPNLKALYLSYNHFSGQIPDDAFTGLNRLRKLYMSNNEFTGQIPSSLATLPSLLILRLDSNKFQGQIPQFQRNKSLKIINLSNNDLEGPIPANLSTFDASSFSGNPGLCGPPLTNEYCQRGAPEASKMRLLKILLAVIAIALIIAIILVAVLLVICRLRSQKHHTLQGQASQNYAPPIYVKTKSLADHYAASPRLVSSSDRGGHGHSRRGEQAGKLTFLSHHQPKFDLQDLLKASAEILGSAGFGSSYKAVVLDGQAVVVKRYKHMNNVPRDEFHEHMRRLGNLNHPNLLPLLAYYYRKDEKFLLTSFVDNGCLASHLHGNRDYQRPGLDWPTRLKIVKGVARGLAHLYSSLPSVIVPHGHIKSSNVLLDESFEPLLTDYALSPVINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYLTLRHNTDSDIASWVNTMITEKRTTDVFDVEMGGIGNSKAELLKLLKIGLSCCEENVERRLDIKEALEQVEDLKETENDAIIGEYSSTLITTERNAYIAV* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0005 664 Coils Coil 620 640 - -
Gso15g0005 664 Pfam Protein kinase domain 367 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0005 664 Gene3D Transferase(Phosphotransferase) domain 1 439 656 - -
Gso15g0005 664 ProSiteProfiles Protein kinase domain profile. 363 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0005 664 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 14 647 - -
Gso15g0005 664 Gene3D Ribonuclease Inhibitor 202 246 IPR032675 -
Gso15g0005 664 Pfam Leucine rich repeat N-terminal domain 37 81 IPR013210 -
Gso15g0005 664 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 647 - -
Gso15g0005 664 Gene3D Ribonuclease Inhibitor 36 201 IPR032675 -
Gso15g0005 664 Pfam Leucine rich repeat 132 193 IPR001611 GO:0005515
Gso15g0005 664 Gene3D Phosphorylase Kinase; domain 1 332 438 - -
Gso15g0005 664 SUPERFAMILY L domain-like 66 226 - -
Gso15g0005 664 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Gso15g0005 664 Pfam Leucine Rich Repeat 205 225 IPR001611 GO:0005515
Gso15g0005 664 SUPERFAMILY Protein kinase-like (PK-like) 367 633 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0005 Gso-Chr15 58313 61067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0005 17 643 Receptor kinase-like Gene Family AT5G35390 48.276 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso15g0005 Pkinase 9.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0005 - - gmx:100801053 1269.99