Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1891 ATGATGGAGGAGATAGACCCCAGAAGTGGTTTCTGCAGCTCCAATTCAATCTTCTACAGCAAGCGTAAGCCCCTCCCACTCCCTCCCAACAACGCCTTAGACGTCACCACCTTCATCTCCTCCCGCGCCCACCGCGCCACCACAGCCTTCGTCGACGCCGCCACCGCCCGCCGCCTCACCTACACCCAGCTATGGCGTTCCGTGGAGGGCGTGGCAGCCTCTCTCTCCGTGGACATGGGGATCCGAAAGGGCAACGTGGTCCTCATCCTCTCCCCCAACTCCATCCACTTCCCCGTTGTGTGCCTGGCCGTCATGTCCCTCGGCGCCATCATCACCACCACCAACCCCCTCAACACCACCCGCGAAATCGCCAAGCAGATCGCCGATTCCAAGCCTCTCCTCGCCTTCACGATCTCTGATTTACTCCCCAAAATCACCGCAGCTGCACCCTCTCTACCAATCGTTCTCATGGACAACGACGGCGCCAATAATAACAATAACAATAATAATATCGTGGCCACTCTTGATGAGATGGCGAAGAAGGAACCGGTGGCTCAGCGCGTGAAAGAGCGCGTGGAGCAGGACGACACGGCCACGCTGCTCTACTCCTCCGGCACCACGGGGCCCAGCAAGGGCGTGGTATCGTCCCACCGCAACCTCATAGCAATGGTCCAGATCGTGCTGGGTCGGTTCCACATGGAGGAGAACGAAACCTTCATATGCACGGTCCCCATGTTTCACATATACGGCCTGGTCGCCTTCGCCACGGGGCTTCTGGCTTCCGGCTCCACCATCGTCGTGCTCTCCAAGTTCGAGATGCACGACATGCTCTCCTCGATCGAGAGGTTCCGCGCCACTTACCTCCCGCTCGTGCCGCCCATTCTGGTGGCCATGCTCAACAACGCCGCCGCTATCAAGGGCAAGTACGATATCACGTCGCTGCATTCGGTGCTCTCCGGTGGGGCTCCGTTGAGCAAGGAGGTCATAGAGGGCTTTGTGGCCAAGTATCCCAACGTCACCATCCTTCAGGGTTATGGTTTGACGGAATCCACCGGCGTTGGGGCCTCCACCGACTCCTTGGAGGAGAGTCGAAGGTACGGCACGGCGGGGCTCTTGTCTCCGGCCACCCAGGCTATGATCGTCGATCCTGAATCCGGCCAATCGCTTCCGGTTAACCGCACCGGGGAGCTCTGGCTCAGGGGTCCCACCATCATGAAAGGTTATTTCAGTAACGAAGAAGCAACCACATCAACCCTTGATTCAAAAGGATGGTTAAGAACAGGGGATATTTGTTACATTGACAATGATGGATTCATATTTATTGTGGATCGGTTAAAGGAGCTCATCAAATACAAGGGATATCAGGTTCCTCCAGCAGAACTAGAGGCCTTGCTACTGACTCATCCTGCTATTTTAGATGCCGCTGTTATCCCGTATCCAGATAAGGAAGCTGGGCAGCATCCAATGGCATACGTGGTGAGGAAGGCTGGAAGTAGCTTATCAGAAACTCAAGTTATGGATTTTGTTGCAGGACAGGTGGCTCCGTACAAGCGGATTCGAAAAGTGGCATTTATTTCCTCCATACCCAAAAATCCATCTGGCAAAATTCTTCGGAAGGATCTCATCAAACTCGCAACGTCTAAACTCTGA 1650 0.5527 MMEEIDPRSGFCSSNSIFYSKRKPLPLPPNNALDVTTFISSRAHRATTAFVDAATARRLTYTQLWRSVEGVAASLSVDMGIRKGNVVLILSPNSIHFPVVCLAVMSLGAIITTTNPLNTTREIAKQIADSKPLLAFTISDLLPKITAAAPSLPIVLMDNDGANNNNNNNNIVATLDEMAKKEPVAQRVKERVEQDDTATLLYSSGTTGPSKGVVSSHRNLIAMVQIVLGRFHMEENETFICTVPMFHIYGLVAFATGLLASGSTIVVLSKFEMHDMLSSIERFRATYLPLVPPILVAMLNNAAAIKGKYDITSLHSVLSGGAPLSKEVIEGFVAKYPNVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPATQAMIVDPESGQSLPVNRTGELWLRGPTIMKGYFSNEEATTSTLDSKGWLRTGDICYIDNDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQHPMAYVVRKAGSSLSETQVMDFVAGQVAPYKRIRKVAFISSIPKNPSGKILRKDLIKLATSKL* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1891 549 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 548 - -
Gso14g1891 549 CDD 4CL 27 541 - -
Gso14g1891 549 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Gso14g1891 549 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Gso14g1891 549 Gene3D - 16 446 IPR042099 -
Gso14g1891 549 SUPERFAMILY Acetyl-CoA synthetase-like 42 546 - -
Gso14g1891 549 Pfam AMP-binding enzyme 43 451 IPR000873 -
Gso14g1891 549 Gene3D - 447 548 IPR045851 -
Gso14g1891 549 PANTHER 4-COUMARATE--COA LIGASE-LIKE 3-RELATED 7 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1891 Gso-Chr14 51361572 51365030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1891 5 549 Monolignol Biosynthesis Gene Families AT1G20500 64.781 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1891 K10526 - gmx:100811344 1052.35