Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1890 ATGGCGGGTCAGTCCTCCAATGAAGGCTCCAGTACTGGAAACATTTCAGCAGAATGTTCCGATTCAACTGTTCAGCTCAATATCAAGACTCTAGATTCCCGCATCTACAGTTTTCAAGTGGACAAAAATATGCCTGTTTCATTGTTCAAAGAGAAAATTGCAAATGAAATTGGTGTTCCTGTTAATCAGCAACGGCTGATATTTAGAGGAAAAGTCTTAAAGGATGAGCATGTTCTTTCTGAGTATCATGTTGAGAATGGGCATACATTGCATTTAGTTGAAAGACAACCAAATCAGTCTCAGGCTTCTGGTATGAGTTCTGGCTCAGGGGCTCCTCGTAATCGTGTTGGGCAAATTTCACATAGTGTTGTTCTGGGAACATTTAATGTGGGTGAACAAGGTGAAGGAATTGTTCATGACCTCACTCGGGTTATTGGGCATGTTTTAAATTCTATTGGAAACAGTGGCCAGAGCACAATTAGTGGTCCTAATGCTACGCAAACTTCTTCAGTTCAGCCAAGGAATGAAACTGATGGAATGCATGCTGGAAATCAAAACCCAGCAGGAAATCAGGCACCATCTGGACAGACATTTCATGGCCCGACATTTCAATCTGTCTCTCATGTTGTTCAGATTCCTGTGGCGGCAGGGACCATACCCATTCCTTCTCTCAATGCACCAATTCCTGATTCACTGAACACACTGTCTGAGTTTATGAATCGCATGGAACAGATACTAACACAAAATGGTTATCAATCAAATCTTTCATCTGCTAACCCTAGAGATCAGCTAGTGGAATTGCCTTCTAATGTACAAGGGTTGCCGACACTTGAAGCATTAAGCACTGTCTTGCATCGTGCAGAACAGTTACTTGGTGGTCAAGCTGTTGCTGCACTATCTCATATTGCAGGGCGCTTGGAAAGAGAAGGTACTTCTGCTGATCTGCACATAAGGGGTCAAATACAATCAGAATCAGTGCAAATAGGACTTGCTATGCAGCATTTGGGTGCACTTCTACTTGAACTTGGCCGAACAATGTTGACACTGCGTATGGGACAGTCTTCTGCAGAATCTGTTGTTAACGCTGGACCAGCAGTTTACATCTCTCCATCAGGGCCAAATCCAATAATGGTGCAGCCTTTTCCACTTCAGACAAGCTCCCTCTTTGGTGGTCCAGTTCCCCCCTCAACTCCTGCAACTTTAGGCACCATTGGAATTGGAAATGCTCCTAGGAACGTAAACATTCATATACATGCTGGTACCTCTCTTGCACCAATTGTTTCAGCCATTGGTTCTAGGGAAAATAATGGCGAGGGGACAAGAAGTGAACACCATAATGAGCCTGGCTCTGGTGATTCAGGTTCAACACGGGTATTACCTGTTAGAAATGTCATAGCAGCAACTATCCCATCACACCCTCCTGGTGTTGGAGTCTCTAGTAGCACACAAACTGGGTTTGGTATTTCTACCTCACAGCCACCTTCTGATTCAGCTTCATTGTCATCTGTTTTAGCTGAAATCAATTCTCGCCTTAGAAACGTTGTTGGTAATATGCAAGGAGATAACACAGTTCCATCAGGTCAAATGGAATCAAACAGCAGGGACTTGTCTTCTGGATCTGAATCAAGACCTCCTACAGTAAACAAACAGCAAGATACCGTGGACGTGAATGGTTTTGGGGCTATCAGTGCTTCCTCAGTTGGCTGCACTTCTGAAAGTGAAGTACAGAAGGTCCAAACCGAGGCAGTCCAAACCTCAAGTAATGTTTTGGTTGACAAATTTGTTTCAAGTTCTTCCAACCAAGATTTACAAAGTTGTTCTAGTGGAGAAACAATAGTAAAACCAGAAATAGAACAAGATGTTCTGGCTGTAAGTGAAAGACAAAATGTAACTGAACCTGCCAAAGCTGCTCCACTAGGATTGGGTGTGGGTGGTTTAGAGCGCAAGAGGCGAACTAGACTTCAACCTCCTGTAAGTAAAGGTGCTGATGATGGATCATCCAGTTCTTCTGTCAATCAAAATCAGCAAACCAGAACAGATGGTCAACATATATTGCAAACTCTTGCAAGTCATGGATCCGGTTTGAATTCAAGAAATGCTAATGGGCCATCCCAGCGGCCCTTGCCCTCCAGTGATCGTCCAATTGATGTGGCTGGTTTAATGTCTCAGGCTTTACATAGTCCTGCCTTGAATGGTTTGTTGGAAGGAGTTTCACAGCAAACTGGAGTTGACTCACCTGATGGCCTGAGGAATATGTTGCATCAGTTCACCCAGAGCCCGCAGATGATGAACACGGTTAATCAAATTGTCCAACAGGTTGGCAGTCAGGATGTGGGGAATATGTTTGCTGGAACGGAAAGAGGGCAGGGTGGTGGTATTGACATTTCAAGGATGTTTCAACAGATGATGCCCATTGTATCTCGAGCCCTTGGTGGGGGAAATCCTTCCTCACTATTCTCTGCTGAAGAAGCTGAACCCCATGCACCCTACCGAGATGGAACAGTTGACAGAGATGAATATTCTGATAATCAAAGTTTACAGCTTTACCTTCAACCACTGGCTGAGAGGATTGAGCACCTGGGTCCTTCTACTGATATTTTCCGTGCTGTAGCTGAAATTGCTGTCCAGCTATCTGGCAGTGGAAGCACTTCTAATGATCTTCTGGATGAGTTGTGCAGCAATGAGAGTCTTGCCAGGGAATATGTAGATATGTTGCGATTTGATGTAAGTAAGCTGCTCGAGGGACATTCTGAAACGGACAATGTCTAA 2769 0.442 MAGQSSNEGSSTGNISAECSDSTVQLNIKTLDSRIYSFQVDKNMPVSLFKEKIANEIGVPVNQQRLIFRGKVLKDEHVLSEYHVENGHTLHLVERQPNQSQASGMSSGSGAPRNRVGQISHSVVLGTFNVGEQGEGIVHDLTRVIGHVLNSIGNSGQSTISGPNATQTSSVQPRNETDGMHAGNQNPAGNQAPSGQTFHGPTFQSVSHVVQIPVAAGTIPIPSLNAPIPDSLNTLSEFMNRMEQILTQNGYQSNLSSANPRDQLVELPSNVQGLPTLEALSTVLHRAEQLLGGQAVAALSHIAGRLEREGTSADLHIRGQIQSESVQIGLAMQHLGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGGPVPPSTPATLGTIGIGNAPRNVNIHIHAGTSLAPIVSAIGSRENNGEGTRSEHHNEPGSGDSGSTRVLPVRNVIAATIPSHPPGVGVSSSTQTGFGISTSQPPSDSASLSSVLAEINSRLRNVVGNMQGDNTVPSGQMESNSRDLSSGSESRPPTVNKQQDTVDVNGFGAISASSVGCTSESEVQKVQTEAVQTSSNVLVDKFVSSSSNQDLQSCSSGETIVKPEIEQDVLAVSERQNVTEPAKAAPLGLGVGGLERKRRTRLQPPVSKGADDGSSSSSVNQNQQTRTDGQHILQTLASHGSGLNSRNANGPSQRPLPSSDRPIDVAGLMSQALHSPALNGLLEGVSQQTGVDSPDGLRNMLHQFTQSPQMMNTVNQIVQQVGSQDVGNMFAGTERGQGGGIDISRMFQQMMPIVSRALGGGNPSSLFSAEEAEPHAPYRDGTVDRDEYSDNQSLQLYLQPLAERIEHLGPSTDIFRAVAEIAVQLSGSGSTSNDLLDELCSNESLAREYVDMLRFDVSKLLEGHSETDNV* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1890 922 MobiDBLite consensus disorder prediction 432 501 - -
Gso14g1890 922 MobiDBLite consensus disorder prediction 661 678 - -
Gso14g1890 922 MobiDBLite consensus disorder prediction 516 553 - -
Gso14g1890 922 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Gso14g1890 922 PANTHER OS07G0498800 PROTEIN 4 920 - -
Gso14g1890 922 MobiDBLite consensus disorder prediction 154 201 - -
Gso14g1890 922 MobiDBLite consensus disorder prediction 635 678 - -
Gso14g1890 922 CDD Ubl_ubiquitin_like 26 93 - -
Gso14g1890 922 Gene3D - 13 108 - -
Gso14g1890 922 MobiDBLite consensus disorder prediction 692 708 - -
Gso14g1890 922 MobiDBLite consensus disorder prediction 474 501 - -
Gso14g1890 922 PRINTS Ubiquitin signature 55 75 IPR019956 -
Gso14g1890 922 PRINTS Ubiquitin signature 76 97 IPR019956 -
Gso14g1890 922 MobiDBLite consensus disorder prediction 692 715 - -
Gso14g1890 922 MobiDBLite consensus disorder prediction 814 838 - -
Gso14g1890 922 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Gso14g1890 922 SUPERFAMILY Ubiquitin-like 19 98 IPR029071 -
Gso14g1890 922 SMART ubq_7 24 95 IPR000626 GO:0005515
Gso14g1890 922 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 4 920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1890 Gso-Chr14 51341953 51356354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1890 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 4.79e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1890 - - gmx:100811870 1711.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1890 14 51341953 51356354 Gso17g2221 17 41891170 41901556 GST