Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1877 ATGGGACTGGGGATGTTTAAGGCATTGTTTTGCTGCAGCAAGCCCCATGAAATTGACATTGCAGACTCCTGGGACTCATCTCCTGATCATACCCCCAAACAACATTCTAAACCAAAGCCAAAGCCAAATGCTGCACCTACTCATTCCAATAATAAACAAACCACCACATCTACACAAATAGGAGCAATTCTAGGGAAACCATACGTGAACATACACCAAATGTACGAGATGAAGAAGGAACTGGGAAGCGGGCAGTCTGGTGTAACATATCTGTGTGTGGAGAAGACGACGAAGCGAGAGTATGCATGCAAATCCATCTCTCGGTCGAAGCTGCTGAGCACGCAGGAGATTGAGGATGTGAGAAGAGAGGTTATGATTCTGCAGCATCTTTCGGGGCAGCCCAACATAGTGGAGTTCAGAGGGGCTTATGAGGACAAGCAGAACGTGCATCTGGTGATGGAGCTGTGCAGTGGGGGCGAACTCTTCGACCGCATCATTGCCAAAGGGAACTACTCCGAGCGTGAAGCTGCCACTGTCATGAGGCAGATTGTCAATGTGGTTCACGTCTGCCATTTCATGGGCGTCATGCATCGAGACCTCAAGCCCGAGAATTTCTTGTTGGCCACCAACCACCCCGATGCAGCCGTAAAAGCCACTGATTTTGGACTCTCCATTTTTATTGAGGAAGGTATAGTGTATAGAGAAATTGTTGGAAGTGCATACTATGTAGCTCCGGAGGTGTTAAAGCGAAATTATGGAAAGGAGATAGATGTGTGGAGCGCAGGAATCATTTTATACATCCTTCTAAGTGGGGTGCCTCCATTTTGGGGCGAAAACGAGAGAAGCATATTTGAAGCTATTTTGGGAGGCAAGCTTGATCTGGAGAGCGCACCATGGCCTTCAATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTGAATAATGACCCTAAGAAACGCATTACAGCTGCCGAAGCCCTTGAACACCCGTGGATGAAGGAAGGTGGTGAAGCATCTGACAAGCCTTTAGACAATGCTGTTTTGACTAGAATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTTATAGCAGAAAACCTTTCAGAGGAAGAAATAAAGGGTTTGAAACAAATGTTCAACAATATGGATACTGATCGCAGTGGCACAATCACATTCGAGGAACTCAAATCTGGATTGACCAAATTGGGATCCAAGCTTAGTGAATCAGAAATAAAGCAGCTAATGGACGCTGCTGATGTTGACAAAAGTGGTACTATTGACTATCAAGAATTCATCACTGCCACCATTAACCGGCATAAACTAGAGAAGGAAGAGAATTTGTTTAAGGCTTTTCAATACTTTGACAAGGATAGCAGTGGATATATAACAAGAGATGAGCTTAGACAAGCTTTGACTGAGTATCAAATGGGAGATGAAGCGACTATAGATGAAGTCATCGACGATGTTGACACTGATAACGACGGGAAAATTAATTACCAGGAGTTTGTGGCTATGATGAGAAAGGGGATCCTGGATATTGATGAGAAAGAGAAACCACAATAA 1581 0.4415 MGLGMFKALFCCSKPHEIDIADSWDSSPDHTPKQHSKPKPKPNAAPTHSNNKQTTTSTQIGAILGKPYVNIHQMYEMKKELGSGQSGVTYLCVEKTTKREYACKSISRSKLLSTQEIEDVRREVMILQHLSGQPNIVEFRGAYEDKQNVHLVMELCSGGELFDRIIAKGNYSEREAATVMRQIVNVVHVCHFMGVMHRDLKPENFLLATNHPDAAVKATDFGLSIFIEEGIVYREIVGSAYYVAPEVLKRNYGKEIDVWSAGIILYILLSGVPPFWGENERSIFEAILGGKLDLESAPWPSISAAAKDLIRKMLNNDPKKRITAAEALEHPWMKEGGEASDKPLDNAVLTRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDRSGTITFEELKSGLTKLGSKLSESEIKQLMDAADVDKSGTIDYQEFITATINRHKLEKEENLFKAFQYFDKDSSGYITRDELRQALTEYQMGDEATIDEVIDDVDTDNDGKINYQEFVAMMRKGILDIDEKEKPQ* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1877 526 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 519 - -
Gso14g1877 526 MobiDBLite consensus disorder prediction 22 59 - -
Gso14g1877 526 SUPERFAMILY Protein kinase-like (PK-like) 75 340 IPR011009 -
Gso14g1877 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Gso14g1877 526 ProSitePatterns EF-hand calcium-binding domain. 496 508 IPR018247 -
Gso14g1877 526 Gene3D - 341 515 - -
Gso14g1877 526 ProSiteProfiles EF-hand calcium-binding domain profile. 448 483 IPR002048 GO:0005509
Gso14g1877 526 MobiDBLite consensus disorder prediction 43 59 - -
Gso14g1877 526 Pfam Protein kinase domain 75 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1877 526 Gene3D Phosphorylase Kinase; domain 1 76 160 - -
Gso14g1877 526 CDD STKc_CAMK 75 332 - -
Gso14g1877 526 ProSiteProfiles EF-hand calcium-binding domain profile. 376 411 IPR002048 GO:0005509
Gso14g1877 526 ProSiteProfiles Protein kinase domain profile. 75 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1877 526 ProSiteProfiles EF-hand calcium-binding domain profile. 484 518 IPR002048 GO:0005509
Gso14g1877 526 ProSiteProfiles EF-hand calcium-binding domain profile. 412 447 IPR002048 GO:0005509
Gso14g1877 526 SMART serkin_6 75 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1877 526 Gene3D Transferase(Phosphotransferase) domain 1 161 340 - -
Gso14g1877 526 ProSitePatterns EF-hand calcium-binding domain. 389 401 IPR018247 -
Gso14g1877 526 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 39 519 - -
Gso14g1877 526 ProSitePatterns EF-hand calcium-binding domain. 461 473 IPR018247 -
Gso14g1877 526 Pfam EF-hand domain pair 381 441 IPR002048 GO:0005509
Gso14g1877 526 Pfam EF-hand domain pair 450 513 IPR002048 GO:0005509
Gso14g1877 526 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524
Gso14g1877 526 SMART efh_1 452 480 IPR002048 GO:0005509
Gso14g1877 526 SMART efh_1 416 444 IPR002048 GO:0005509
Gso14g1877 526 SMART efh_1 487 515 IPR002048 GO:0005509
Gso14g1877 526 SMART efh_1 380 408 IPR002048 GO:0005509
Gso14g1877 526 SUPERFAMILY EF-hand 372 513 IPR011992 -
Gso14g1877 526 MobiDBLite consensus disorder prediction 22 36 - -
Gso14g1877 526 ProSitePatterns EF-hand calcium-binding domain. 425 437 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1877 Gso-Chr14 51196851 51203700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1877 28 515 EF-hand Containing Proteins AT3G20410 66.667 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso14g1877 Pkinase 1.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1877 K13412 - gmx:100816157 1021.92