Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1872 ATGGCAACTATTGCTACAGTTATGCTTATAACTATGTCCCTGGCTTCTCTTGTGAGTGCACTAAATGTAAATTACTATGAAAATGCGTGCCCCCATAATGTAGATTCCATTGTAGCTGCTGCTGTTCACAAAGCAACCATGAATGACAAAACTGTCCCAGCTGCTCTTCTTCGGATGCATTTTCATGATTGCTTCATAAGGGGTTGTGATGCCTCTGTTCTTCTCGAATCAAAAGGTAAGAAAAAAGCAGAAAAGGATGGACCTCCTAACATTTCTTTACATGCATTCTATGTCATTGACAACGCTAAGAAAGCAGTGGAAGCCGTTTGCCCCGGGGTAGTATCTTGTGCTGATATTTTGGCTCTTGCTGCTAGGGATGCTGTTGCTCTGTCGGGAGGACCCACTTGGGATGTGCCAAAAGGAAGAAAGGATGGAAGGATATCAAAGGCCACAGAAACCAGACAATTGCCGGCTCCCACCTTCAACATCTCCCAATTACAACAAAGCTTCTCCCAAAGAGGCCTTTCCTTGGAAGATCTTGTAGCCCTCTCAGGAGGTCACACCCTGGGGTTTGCTCATTGTTCATCTTTCCAAAACAGAATCCATAAGTTCAGCCAGAAACTAGAGATTGACCCATCTCTGAACCCTTCATTCGCAAGAAGCCTCCGAGGCATATGCCCCTCTCACAACAAGGTTAAAAATGCAGGAAGCTCATTGGATTCTAGTTCCACCTTGTTTGACAATGCTTATTACAAGCTACTCCTCCAAGGAAAGAGCTTATTCTCCTCTGATCAAGCTCTGCTCACTCATCCCACCACTAAAGCTTTGGTTTCCAACTTTGCTGATTCGCAAGAGGAATTTGAAAGGGCCTTCGTCAAGTCCATGATCAAGATGAGCAGCATCACCAACGGTGGACAAGAAATCAGGCTCAATTGTAAACTCGTTAGATGA 951 0.4469 MATIATVMLITMSLASLVSALNVNYYENACPHNVDSIVAAAVHKATMNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKKKAEKDGPPNISLHAFYVIDNAKKAVEAVCPGVVSCADILALAARDAVALSGGPTWDVPKGRKDGRISKATETRQLPAPTFNISQLQQSFSQRGLSLEDLVALSGGHTLGFAHCSSFQNRIHKFSQKLEIDPSLNPSFARSLRGICPSHNKVKNAGSSLDSSSTLFDNAYYKLLLQGKSLFSSDQALLTHPTTKALVSNFADSQEEFERAFVKSMIKMSSITNGGQEIRLNCKLVR* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1872 316 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 Pfam Peroxidase 39 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Gso14g1872 316 Gene3D Peroxidase, domain 2 157 298 - -
Gso14g1872 316 PANTHER PEROXIDASE 25-RELATED 6 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 SUPERFAMILY Heme-dependent peroxidases 21 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 CDD secretory_peroxidase 21 315 IPR033905 GO:0004601|GO:0042744
Gso14g1872 316 PANTHER PEROXIDASE 64 6 315 - -
Gso14g1872 316 ProSiteProfiles Plant heme peroxidase family profile. 20 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 Gene3D - 24 315 - -
Gso14g1872 316 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1872 316 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1872 Gso-Chr14 51149185 51151429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1872 2 316 Peroxidase AT5G42180 72.468 1.45e-175 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1872 K00430 - gmx:100820056 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1872 14 51149185 51151429 Gso17g2209 17 41800210 41801298 GST