LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso14g1869	ATGGTCACTGCTGCTAAATCTTCAAACCACCACTCGCCCCCCAGTGCTCCGTCACCGGCGCAGCCCGGAGACGGCAACAGCCCCAAGTTCCCGCGAAAAAATCTTCCCTCGCCGTGGGCTCAGGTAGTTCGCGGCGGCGAGCCGGAATCGGCGGGCTGCATTCACCAATCACCGCCGTCATCGTCCTCGTCGTCGTCCTCGTCTCTGGTTGCTGATCAAGCCCCGTCATCGGAGGTGATTCCGGTGTCGTCGCCGGTGGATAATTCTAATACGGTTGGTGATGTAGATAGTTCCGATGGCGCTGAAGGCAATGCGGATCGTTCTAAAAAGCCCGTTTGGAACAAGCCCTCAAACGGCGTCGTCGTCGTCGAGACTGGGCCTGTAATGGGCGCTGCTGAATCATGGCCCACTTTGCTTGCGTCCACCAAAGGTTCTGCTAAATTGCCTGCTGAATCGTCCTCCAAGACTGTTACCGATGATGGATCACTCTCCACTTCTCAGAAACAAGCGACTACTATTGCAAAACCTAGTTCTGCACCAAATTATAATGTGCCTAGTAGACAAAGATCGATGAAGCGGGTAGGTGGCAGCAGCACTGGATCTGGTCCTTCACAGAGCAACTTCTCCAACCCTCCCCCAACGCCACCCCCGCCCCCGCCTTTTCCTGTATACCAGCTCCCACCAGTTAGCTATGGTAATATGGTACCAGGTGTCCCTGACCATGCTCCAAGAGATCATTACCGGAACAATAACTGGGATGCAAGACCATTGGTTGGGGGTTTTGTGCCTGCAATGAATGAATATCGGGGTTCCTCTCGCAGGGGTTATTTTGGGCCTCATCCACGAGGAGATGGTTCCTATCATAATAGTTATGGTAGCAGGCGTGATCATCAAGATCGTGGAAATTATGTGAATGCTAGAGATGCTTTTCTACCTCAACCAAGGATGCCTCCAAGAGGATTACTGAGGCACCCACCACCTAATACCGCTGCATTTGTGGGCCCTCAGCCTATTGGACCATTTGCTAACCCCATCAGTTTTCCTGAGTTCTATTACTATCAACCAGTAACAGTGGAACAGTTTACGGGTATGCCATTCTTCACTCACAGCCCTCCTCCTACACCGATCTTCTCTGCCGCAGAATCTCCTCTCTCTAATATGATAGTCTACCAAATTGAATATTACTTTAGTGATGCTAATTTAGTGAAAGACGCGTTTTTAAGGTCTAAAATGGACGAACAGGGTTGGGTTCCTGTTACTTTGATAGCAGACTTTCCTCGAGTTAAAAATTTGACAACCAACATTCAGTTGATACTTGACTCTCTCAGAACTTCTACTGTTGTGGAAGTGCAAGGTGACAAGTTAAGGAGACTTAACGAGTGGATGAGATGGCTGCCCTCTGCTCAGCGACGATCTAATTCTGGTTCAATATCTCCTAGTGGGTCAACACACAATAATCTTACAGCTAATTTTCAAACTATCATCTTGGAAGAAACCACTGCAGATGAAAGTCCAACACAGCCAAACGGTGGTGATGCTACTAAGAGCAGCATTTAA	1557	0.492	MVTAAKSSNHHSPPSAPSPAQPGDGNSPKFPRKNLPSPWAQVVRGGEPESAGCIHQSPPSSSSSSSSSLVADQAPSSEVIPVSSPVDNSNTVGDVDSSDGAEGNADRSKKPVWNKPSNGVVVVETGPVMGAAESWPTLLASTKGSAKLPAESSSKTVTDDGSLSTSQKQATTIAKPSSAPNYNVPSRQRSMKRVGGSSTGSGPSQSNFSNPPPTPPPPPPFPVYQLPPVSYGNMVPGVPDHAPRDHYRNNNWDARPLVGGFVPAMNEYRGSSRRGYFGPHPRGDGSYHNSYGSRRDHQDRGNYVNARDAFLPQPRMPPRGLLRHPPPNTAAFVGPQPIGPFANPISFPEFYYYQPVTVEQFTGMPFFTHSPPPTPIFSAAESPLSNMIVYQIEYYFSDANLVKDAFLRSKMDEQGWVPVTLIADFPRVKNLTTNIQLILDSLRTSTVVEVQGDKLRRLNEWMRWLPSAQRRSNSGSISPSGSTHNNLTANFQTIILEETTADESPTQPNGGDATKSSI*	519

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso14g1869	518	MobiDBLite	consensus disorder prediction	273	299	-	-
	Gso14g1869	518	CDD	LAM	386	457	-	-
	Gso14g1869	518	MobiDBLite	consensus disorder prediction	1	119	-	-
	Gso14g1869	518	SUPERFAMILY	"Winged helix" DNA-binding domain	379	466	IPR036390	-
	Gso14g1869	518	MobiDBLite	consensus disorder prediction	208	225	-	-
	Gso14g1869	518	MobiDBLite	consensus disorder prediction	497	518	-	-
	Gso14g1869	518	MobiDBLite	consensus disorder prediction	142	207	-	-
	Gso14g1869	518	Pfam	La domain	388	443	IPR006630	-
	Gso14g1869	518	PANTHER	LUPUS LA PROTEIN-RELATED	5	507	IPR045180	-
	Gso14g1869	518	SMART	la	382	458	IPR006630	-
	Gso14g1869	518	ProSiteProfiles	La-type HTH domain profile.	378	467	IPR006630	-
	Gso14g1869	518	MobiDBLite	consensus disorder prediction	54	97	-	-
	Gso14g1869	518	Gene3D	-	378	466	IPR036388	-
	Gso14g1869	518	MobiDBLite	consensus disorder prediction	142	225	-	-
	Gso14g1869	518	PANTHER	LA-RELATED PROTEIN 1B	5	507	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso14g1869	Gso-Chr14	51117224	51121678	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso14g1869	K18757		-	gmx:100785504	957.592

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso14g1869	14	51117224	51121678	Gso17g2206	17	41777344	41781685	GST
	Gso14g1869	14	51117224	51121678	Gso4g0196	4	1723409	1729107	PCT
	Gso14g1869	14	51117224	51121678	Gso6g0177	6	1650636	1655373	PCT
	Gso4g0196	4	1723409	1729107	Gso14g1869	14	51117224	51121678	PCT
	Gso6g0177	6	1650636	1655373	Gso14g1869	14	51117224	51121678	PCT