Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1826 ATGGATGGCTCACTTATCATAGTAGTGCCTCCTTTACCATTTGACCATATTTATCCATCTCAATCACTTCCCACTTTTTATGAAGCATTGGCTACACCTTCCTTTATTCTCTCCTCTCAAACCTTTCACTTCAAGCTTCAAGTTTTCAAGCTACCCACCCACTGCTCATACTCACACCCAATGAAGATCCAGTGCGACGTGTGCAACAAACACGAGGCCTCCGTCTTCTGCACAGCCGACGAAGCCGCCCTCTGCGACGGCTGCGACCACCGTGTCCACCATGCCAACAAACTCGCCTCCAAACACCAACGCTTCTCTCTTCTCCGCCCTTCTCATAAACAACACCCTCTCTGCGATATTTGCCAGGAGAGAAGAGCCTTCACGTTCTGTCAGCAAGACAGAGCGATTCTCTGCAAAGAGTGTGACGTGTCAATTCACTCTGCCAACGAACACACCCTTAAGCACGATAGGTTCCTTCTCACTGGTGTTAAACTCGCAGCTTCTGCCATGCTTCGTTCATCACAAACTACCTCTGATTCAAACTCAACCCCTTCTCTTCTTAACGTTTCACATCAAACTACTCCACTTCCATCTTCCACCACCACCACCACCACCAACAACAACAACAACAAGGTTGCTGTTGAAGGAACTGGTTCAACGAGTGCTAGCAGCATATCAGAGTATTTGATAGAGACTCTTCCTGGGTGGCAAGTTGAGGACTTTCTCGATTCATATTTTGTTCCCTTTGGTTTCTGTAAGAATGATGAAGTGTTGCCACGGTTGGATGCTGACGTGGAGGGGCATATGGGTTCGTTTTCAACCGAGAACATGGGGATCTGGGTTCCTCAAGCGCCACCACCTCTTGTGTGTTCTTCACAAATGGATCGGGTGATAGTTCAAAGTGAGACCAACATCAAAGGTAGCAGCATATCGAGGTTGAAGGATGATACTTTCACTGTTCCACAGATTAGTCCTCCCTCCAATTCCAAGAGAGCCAGATTTCTATGGTAG 1011 0.4748 MDGSLIIVVPPLPFDHIYPSQSLPTFYEALATPSFILSSQTFHFKLQVFKLPTHCSYSHPMKIQCDVCNKHEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLLRPSHKQHPLCDICQERRAFTFCQQDRAILCKECDVSIHSANEHTLKHDRFLLTGVKLAASAMLRSSQTTSDSNSTPSLLNVSHQTTPLPSSTTTTTTNNNNNKVAVEGTGSTSASSISEYLIETLPGWQVEDFLDSYFVPFGFCKNDEVLPRLDADVEGHMGSFSTENMGIWVPQAPPPLVCSSQMDRVIVQSETNIKGSSISRLKDDTFTVPQISPPSNSKRARFLW* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1826 336 MobiDBLite consensus disorder prediction 174 218 - -
Gso14g1826 336 Gene3D Classic Zinc Finger 61 155 - -
Gso14g1826 336 CDD Bbox1_BBX-like 117 160 - -
Gso14g1826 336 ProSiteProfiles Zinc finger B-box type profile. 60 107 IPR000315 GO:0008270
Gso14g1826 336 CDD Bbox1_BBX-like 65 107 - -
Gso14g1826 336 PANTHER B-BOX ZINC FINGER PROTEIN 19 61 333 - -
Gso14g1826 336 PANTHER B-BOX ZINC FINGER PROTEIN 22 61 333 - -
Gso14g1826 336 ProSiteProfiles Zinc finger B-box type profile. 113 160 IPR000315 GO:0008270
Gso14g1826 336 SMART bboxneu5 113 160 IPR000315 GO:0008270
Gso14g1826 336 SMART bboxneu5 60 107 IPR000315 GO:0008270
Gso14g1826 336 Pfam B-box zinc finger 114 153 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1826 Gso-Chr14 50657713 50659544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1826 61 336 C2C2-CO-like Transcription Factor Family AT1G75540 46.429 2.81e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Gso14g1826 zf-B_box 2.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1826 - - gmx:100790972 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1826 14 50657713 50659544 Gso17g2161 17 41278153 41280013 GST
Gso14g1826 14 50657713 50659544 Gso4g0080 4 740055 741756 PCT
Gso14g1826 14 50657713 50659544 Gso6g0071 6 726602 728378 PCT
Gso4g0080 4 740055 741756 Gso14g1826 14 50657713 50659544 PCT
Gso6g0071 6 726602 728378 Gso14g1826 14 50657713 50659544 PCT