Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1825 ATGGCTGGGTTCTTCTCTTTAGGAGCAGGAAGGCAGAACAAGGCGGAACAAGAAGAAGATCAAAGAGAAGAGAACGTTAACAACGCCGGTGGTAATAATAACAGTCAATTCTTGTTCAGAAACAACGTTAGCGAAGAGATCTACAACAAGGGATTCGAGATATGGCCACAATCCTCGTACCACCACCACCAGAACTTGACCAACTTCTACTCCTTCGGTGTGGGCCCTAGTCGCAGGAACAACCACAACAACAGCTCCTCCAACAACGTAAACGACGACGTTTCTGTGTCTTTCTCGGATGAGTCGAACCGGTTCGGGTTCACGGTGATGAGCTCCGGTGGCGGCGGCGGCGGAGGAATGAACTGTCAGGACTGTGGGAACCAAGCGAAGAAAGATTGTCAACACCTCAGATGCAGAACCTGCTGCAAGAGTCGAGGGTTTCAGTGTCAAACGCACGTTAAGAGCACTTGGGTTCCTGCGGCTAAACGCCGTGAACGACAGCAACAACTTTCTGCTTTGCAGCAGCAACAAAATCAACACCCACAGTTTCGTGGAGATCACTCAAAACGACACAGAGAAAGCATCGAAGGTGCTGCTGCTGGTTCTCTCGCTTGCGTTCCAGTTCCGATCACCACCACAGGGTTGGAGCTGGGGCAATTTCCACCAGAGCTAAACTCACCGGCGGTGTTTCGGTGTGTGAAAGTGAGTGCAATGGACGCACCGGACGAGCGTTACGCGTATCAAACCGCAGTGAACATAGGAGGGCACGTCTTCAAGGGAATTCTCTACGACCAAGGAATGGACGGTCCTTATGCGGGTGCAGGTTGTGAGGGTTCCTCCGGTGTCGGTGGCGAAGCTCAGCCACTAAGTCTCATGGCCGCCGCCACAACCACCACCGCCGCCACAACAACAAGCGGAAACCCTTTTGAGGCTTCACTCTACACGGCTCCGATGAATGCCTACATGGCTGGTACGCACTTCTTCCCACCCTCAAGATCCTAA 1002 0.5269 MAGFFSLGAGRQNKAEQEEDQREENVNNAGGNNNSQFLFRNNVSEEIYNKGFEIWPQSSYHHHQNLTNFYSFGVGPSRRNNHNNSSSNNVNDDVSVSFSDESNRFGFTVMSSGGGGGGGMNCQDCGNQAKKDCQHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLSALQQQQNQHPQFRGDHSKRHRESIEGAAAGSLACVPVPITTTGLELGQFPPELNSPAVFRCVKVSAMDAPDERYAYQTAVNIGGHVFKGILYDQGMDGPYAGAGCEGSSGVGGEAQPLSLMAAATTTTAATTTSGNPFEASLYTAPMNAYMAGTHFFPPSRS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1825 333 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 330 - -
Gso14g1825 333 MobiDBLite consensus disorder prediction 1 36 - -
Gso14g1825 333 Pfam Domain of unknown function (DUF702) 119 268 - -
Gso14g1825 333 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 219 267 IPR006511 -
Gso14g1825 333 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 330 IPR007818 GO:0003700|GO:0006355
Gso14g1825 333 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 121 163 IPR006510 -
Gso14g1825 333 MobiDBLite consensus disorder prediction 165 191 - -
Gso14g1825 333 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1825 Gso-Chr14 50621111 50623930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1825 1 332 C2H2 Transcription Factor Family AT1G19790 46.866 1.62e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gso14g1825 DUF702 2e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1825 - - gmx:100794846 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1825 14 50621111 50623930 Gso17g2160 17 41244018 41246791 GST
Gso14g1825 14 50621111 50623930 Gso4g0081 4 747503 748879 PCT
Gso14g1825 14 50621111 50623930 Gso6g0221 6 2135425 2138024 PCT
Gso4g0081 4 747503 748879 Gso14g1825 14 50621111 50623930 PCT
Gso6g0221 6 2135425 2138024 Gso14g1825 14 50621111 50623930 PCT