Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1824 ATGGCTCGCTACTCCTTCCTCTTGGCCCTCCTCCTCCTCCTCTTCGCCGCCGTGTCCAGCGCCGCCGACGACATCCTGATCCGTCAGGTGGTGCCGGATGCCGTCGGCGAAGCGGCGGAGAAGGAGGAGGACCACCTGCTGAACGCGGAGCACCACTTCGCGAGCTTCAAGGCGAAGTTCGGGAAGAAGTACGCGACCAAGGAGGAGCACGACCGTCGCTTCGGCGTCTTCAAGTCCAACCTCCGCAGAGCGAGGCTGCACGCCAAGCTCGACCCCTCCGCCGTCCACGGCGTCACCAAATTCTCCGATCTCACTCCGGCCGAGTTCCGCCGCCAATTCCTGGGCCTCAAGCCGCTGCGCTTGCCGGCGAACGCTCAGAAGGCACCCATTCTCCCCACCAAGGATCTCCCAAAGGATTTCGATTGGCGAGACAAAGGAGCCGTCACTAACGTCAAGGACCAAGGGGCGTGTGGTTCGTGCTGGTCTTTCAGTACCACGGGAGCGTTGGAAGGAGCTCATTATCTGGCCACTGGTGAGCTTGTGAGCCTTAGTGAGCAACAGCTTGTGGATTGCGACCACGTGTGTGATCCAGAAGAATATGGAGCGTGTGACTCGGGCTGTAATGGTGGGTTGATGAACAATGCATTTGAGTACATACTTCAGTCTGGGGGAGTACAGAAAGAAAAGGACTATCCATACACGGGGAGAGATGGCACCTGCAAATTTGACAAAACCAAAGTTGCAGCTACTGTATCTAATTACAGTGTGGTTTCCCTTGATGAAGATCAAATTGCTGCAAACCTAGTGAAGAATGGCCCTCTTGCAGTTGGTATCAATGCAGTTTTTATGCAGACATATATAGGTGGCGTGTCGTGCCCGTACATCTGTGGGAAGCATTTGGATCATGGTGTTCTTATAGTGGGTTATGGTGAAGGTGCATATGCTCCCATTCGTTTTAAGAACAAGCCTTACTGGATCATTAAGAATTCATGGGGTGAGAGCTGGGGAGAGAATGGATATTACAAGATTTGCAGAGGTCGAAATGTGTGTGGAGTAGATTCCATGGTCTCAACTGTAGCTGCTATATATCCATCCAGCCATTAA 1104 0.5317 MARYSFLLALLLLLFAAVSSAADDILIRQVVPDAVGEAAEKEEDHLLNAEHHFASFKAKFGKKYATKEEHDRRFGVFKSNLRRARLHAKLDPSAVHGVTKFSDLTPAEFRRQFLGLKPLRLPANAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDGTCKFDKTKVAATVSNYSVVSLDEDQIAANLVKNGPLAVGINAVFMQTYIGGVSCPYICGKHLDHGVLIVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAIYPSSH* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1824 367 SMART pept_c1 136 360 IPR000668 GO:0006508|GO:0008234
Gso14g1824 367 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 154 165 IPR000169 -
Gso14g1824 367 Pfam Cathepsin propeptide inhibitor domain (I29) 53 109 IPR013201 -
Gso14g1824 367 Gene3D Cysteine proteinases 28 360 - -
Gso14g1824 367 SMART Inhibitor_I29_2 53 109 IPR013201 -
Gso14g1824 367 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 300 310 IPR025660 -
Gso14g1824 367 SUPERFAMILY Cysteine proteinases 50 359 IPR038765 -
Gso14g1824 367 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 361 - -
Gso14g1824 367 Pfam Papain family cysteine protease 136 358 IPR000668 GO:0006508|GO:0008234
Gso14g1824 367 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 324 343 IPR025661 -
Gso14g1824 367 PANTHER CYSTEINE PROTEASE RD19C-RELATED 30 361 - -
Gso14g1824 367 CDD Peptidase_C1A 137 359 IPR039417 -
Gso14g1824 367 PRINTS Papain cysteine protease (C1) family signature 154 169 IPR000668 GO:0006508|GO:0008234
Gso14g1824 367 PRINTS Papain cysteine protease (C1) family signature 302 312 IPR000668 GO:0006508|GO:0008234
Gso14g1824 367 PRINTS Papain cysteine protease (C1) family signature 324 330 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1824 Gso-Chr14 50606587 50609386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1824 K01373 - gmx:100791503 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1824 14 50606587 50609386 Gso17g2159 17 41232155 41235229 GST
Gso14g1824 14 50606587 50609386 Gso4g0244 4 2241730 2243481 PCT
Gso14g1824 14 50606587 50609386 Gso6g0223 6 2156074 2158065 PCT
Gso4g0244 4 2241730 2243481 Gso14g1824 14 50606587 50609386 PCT
Gso6g0223 6 2156074 2158065 Gso14g1824 14 50606587 50609386 PCT