Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1822 ATGATGAGTTTGTGTTCCTCTCAAGGAACCTGTTCTGGTGACACCAATGCACTCGTTTCCTCTTCTGCTGTTGGAAATGAGCCTTCTGACTACAAAAGGCATAACAACAAACTCATGACCTTTTTGAAAAAAACCATGTGGGAGTATGCTTTCGCATGTGTTGGTGTTGTTCCTTGTGGCGGCAATAACGACCTTAACGGTCAAAGGAAGGCAACTTTGAAGCACAATAAGGCGTGGTTGCTGGCGGATTCTGGAGCAGAATTGGCGAGTGCTGACCCTCGATCGGTTCACTCGTCTTTCAGGTTCAGCTTCTGCTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGCTATTCTGCTTCTGCTGCTGCTGCAACCTTTTTGATGGTGAATTTGGACTATGAGTCTCAAGTGAAGGAGTTAAAATGGAGGAGAATACAGTCACCGGAGAAAAGCTTGTCTCCCGTGGCCAACACTTTGATCAGGTTCAGCTATGATGAAATTCTGTCTGCTACTCACAATTTCTCCAAAGAGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTTTAGAGGAAGAGTTGGGATTTGGAGGACTTCTGTTGCTATTAAAAGGTTGGATAAGGAAGACAAGGAGTGTGTCAAGGCGTTTTGCAGAGAATTGATGATTGCTAGTTCTCTGCATAACACAAATGTTGTTCCTCTTGTGGGGTTTTGTATTGACTCAGAGGAGGGTTTGTTTTTGGTGTACAAGTATGTGTCAGGGGGAAGCTTAGAGCATCACTTACATGGGAGGAAGAAGGGTAGTTCACCACTTCCATGGTCTGTGAGGTACAAAGTTGCAATTGGGATTGCAGAAGCAGTGGCTTATCTGCATCATGGAACAGAAAGATGTGTTGTTCATAGAGACATTAAGCCCTCAAACATTCTGCTTTCCTCTAAGAAGATTCCCAAGTTATGTGATTTTGGACTAGCTTCATGGACTTCTGCACCTTCAGTTCCTTTCCTTTGCAAAACTGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGAAAAGTTTCAGATAAGACTGATGTTTACGCTTTGGGAGTTGTTCTATTGGAGCTCTTAACTGGCCGCAAGCCAATTGAAGCAAAAAGAACCCCTGGAGAGGAAAACTTGGTAGTATGGGCTAAACCTTTGCTGAGAAAAGGGAAAGGAGCCATTGAAGAGTTGCTTGATTCTCAAGTCAAATACAATTTGAGTTACACAGATCAAATGGCTCGCATGATTGATGCCGCAGCTGCCTGTGTTACAAGTGAAGAATCTAGGAGGCCAAGCATAGGTGAGATTGTTGCAATATTGAAAGGAGAAGTAGAGCCTGTACTCTCTAGAAGAAGGAAATCTGGTTATTTTGGTAATGGATATGTGATTGATTATTACCCTCAATTACAAGAAACAAATAATGAGATGAAAAGTCACTTGGCTTTGGCAATGCTAGGAGTTTCAGAGTGTGAGGATGATGATTTTCTCTATGGTCATTGA 1533 0.4299 MMSLCSSQGTCSGDTNALVSSSAVGNEPSDYKRHNNKLMTFLKKTMWEYAFACVGVVPCGGNNDLNGQRKATLKHNKAWLLADSGAELASADPRSVHSSFRFSFCSQVEVESFNMSYSASAAAATFLMVNLDYESQVKELKWRRIQSPEKSLSPVANTLIRFSYDEILSATHNFSKERVLGRGALSCVFRGRVGIWRTSVAIKRLDKEDKECVKAFCRELMIASSLHNTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGRKKGSSPLPWSVRYKVAIGIAEAVAYLHHGTERCVVHRDIKPSNILLSSKKIPKLCDFGLASWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYALGVVLLELLTGRKPIEAKRTPGEENLVVWAKPLLRKGKGAIEELLDSQVKYNLSYTDQMARMIDAAAACVTSEESRRPSIGEIVAILKGEVEPVLSRRRKSGYFGNGYVIDYYPQLQETNNEMKSHLALAMLGVSECEDDDFLYGH* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1822 510 SMART serkin_6 174 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1822 510 SUPERFAMILY Protein kinase-like (PK-like) 150 452 IPR011009 -
Gso14g1822 510 Gene3D Phosphorylase Kinase; domain 1 159 251 - -
Gso14g1822 510 Gene3D Transferase(Phosphotransferase) domain 1 252 463 - -
Gso14g1822 510 PANTHER OS01G0750732 PROTEIN 23 508 - -
Gso14g1822 510 Pfam Protein kinase domain 174 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1822 510 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 23 508 - -
Gso14g1822 510 ProSiteProfiles Protein kinase domain profile. 174 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1822 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1822 Gso-Chr14 50563258 50566439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1822 162 454 Trihelix Transcription Factor Family AT1G70460 42.373 2.28e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gso14g1822 Pkinase 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1822 - - gmx:100820245 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1822 14 50563258 50566439 Gso2g2098 2 45582569 45585647 GST
Gso18g0347 18 3283586 3286862 Gso14g1822 14 50563258 50566439 PCT
Gso13g1268 13 27958252 27961370 Gso14g1822 14 50563258 50566439 PCT
Gso14g1822 14 50563258 50566439 Gso18g0347 18 3283586 3286862 PCT
Gso14g1822 14 50563258 50566439 Gso13g1268 13 27958252 27961370 PCT