Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1811 ATGAAGTCTGCGCGAGTCAAAGAAGCGATTCTGTTAGTGTTTATGTTTAGTCTCTTAAGCATTGCTTGTTCGGATCTAGCTTCGGACAGAGCGGGGTTGTTGTTACTCCGAAGCGCGGTGGGGGGACGCACGTTGTTATGGAACTCGACCCAAACAAGCCCTTGTTCGTGGACCGGCGTGGTTTGCGCCAGCGGGAGAGTAATTATGTTGCGTCTTCCCGCGATGGGTCTCTCCGGTTCGCTTCCCTCCGGTTTGGGCAACCTCACCGAACTGCAGACACTTTCCCTCCGGTTCAACGCGCTAACCGGACGAATCCCCGAAGATTTCGCAAACCTGAAATCTCTCCGCAACCTCTACTTACAGGGAAACTTCTTCTCCGGCGAGGTCTCCGATTCGGTGTTCGCGTTGCAGAATCTGGTTAGGTTGAATTTAGGTAACAACAATTTCAGCGGTGAGATTTCGCCAAAGTTCAACAGCTTAACTCGTTTGGCCACTCTTTATTTAGAACGCAACAATTTCACTGGTTCTATCCCTGACCTTGATGCTCCGCCGCTCGATCAGTTCAACGTGTCGTTTAATTCGCTGACCGGATCCATTCCGAACCGGTTTTCGCGTCTGGACCGAACCGCTTTTCTCGGAAACTCGCAGCTCTGCGGGAGGCCATTGCAGCTTTGCCCCGGAACTGAGGAGAAGAAGAAGAGTAAACTATCCGGTGGCGCTATTGCGGGTATTGTTATTGGTTCCGTGGTTGGTGTGTTGTTGATTCTGCTGCTTTTGTTCTTTTTGTGTAGAAAAAGGAACAAGAAAGATGAGAATGAAACTTTGCCACCTGAGAAGCGTGTCGTGGAAGGTGAAGTAGTGTCTCGTGAGAAGAGTAATGAGAGTGGCGGGAATTCAGGTTCAGTGGAGAAGAGTGAGGTTCGGAGTAGCAGTGGTGGTGGTGGAGATAATAAGAGTTTGGTGTTTTTTGGGAATGTGAGTAGAGTTTTTAGTTTGGATGAGTTGTTGAGGGCATCAGCTGAAGTTTTGGGGAAAGGCACCTTTGGGACGACTTATAAGGCGACGATGGAGATGGGGGCGAGTGTGGCGGTGAAGAGGTTGAAGGATGTTACTGCAACAGAGAAGGAATTCAGGGAGAAGATTGAGCAAGTGGGGAAGATGGTTCATCACAACTTGGTCCCACTAAGGGGTTATTTCTTTAGCAGGGATGAGAAGCTTGTTGTGTATGATTACATGCCTATGGGAAGCTTATCTGCTCTCTTACATGCAAATGGTGGAGTGGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCCATTGCCCTTGGCGCTGCTCGTGGGATTGCATACATTCATTCACTTGGCCCAACATCCTCCCATGGAAACATCAAGTCATCGAATATCCTTCTCACCAAAACTTTTGAAGCTCGCGTCTCTGACTTTGGCCTTGCGTACCTTGCTCTCCCAACCTCTACACCAAACCGTGTGTCTGGTTACTGTGCGCCAGAGGTCACTGATGCACGCAAAATATCCCAAAAAGCCGATGTCTATAGCTTTGGTATCATGCTTTTGGAGCTGCTTACAGGGAAGGCTCCTACTCATTCTTCACTTAATGATGAAGGGGTGGACCTTCCAAGATGGGTCCAATCTGTGATTCAAGATGAGTGGAACACTGAGGTATTTGACATGGAGCTTCTAAGGTACCAAAGTGTTGAGGAGGAAATGGTCAAGCTTTTGCAGCTTGCCCTTGAATGTACTGCTCAATATCCTGATAAGAGACCTTCAATGGATGTGGTGGCAAGCAAGATTGAGGAAATTTGTCATCCTAGTTTAGAGAAAGAGGAAGAGAAGAATCATGATTTTAAAGATGCTGATAATGGATTTTCCCAACAGTACCATTCTGTTGACTCGGGTGTGTCACAAGCTTGA 1929 0.48 MKSARVKEAILLVFMFSLLSIACSDLASDRAGLLLLRSAVGGRTLLWNSTQTSPCSWTGVVCASGRVIMLRLPAMGLSGSLPSGLGNLTELQTLSLRFNALTGRIPEDFANLKSLRNLYLQGNFFSGEVSDSVFALQNLVRLNLGNNNFSGEISPKFNSLTRLATLYLERNNFTGSIPDLDAPPLDQFNVSFNSLTGSIPNRFSRLDRTAFLGNSQLCGRPLQLCPGTEEKKKSKLSGGAIAGIVIGSVVGVLLILLLLFFLCRKRNKKDENETLPPEKRVVEGEVVSREKSNESGGNSGSVEKSEVRSSSGGGGDNKSLVFFGNVSRVFSLDELLRASAEVLGKGTFGTTYKATMEMGASVAVKRLKDVTATEKEFREKIEQVGKMVHHNLVPLRGYFFSRDEKLVVYDYMPMGSLSALLHANGGVGRTPLNWETRSAIALGAARGIAYIHSLGPTSSHGNIKSSNILLTKTFEARVSDFGLAYLALPTSTPNRVSGYCAPEVTDARKISQKADVYSFGIMLLELLTGKAPTHSSLNDEGVDLPRWVQSVIQDEWNTEVFDMELLRYQSVEEEMVKLLQLALECTAQYPDKRPSMDVVASKIEEICHPSLEKEEEKNHDFKDADNGFSQQYHSVDSGVSQA* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1811 642 MobiDBLite consensus disorder prediction 291 313 - -
Gso14g1811 642 PANTHER OS05G0588300 PROTEIN 9 619 - -
Gso14g1811 642 MobiDBLite consensus disorder prediction 272 290 - -
Gso14g1811 642 MobiDBLite consensus disorder prediction 610 642 - -
Gso14g1811 642 Pfam Protein kinase domain 340 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1811 642 MobiDBLite consensus disorder prediction 627 642 - -
Gso14g1811 642 CDD STKc_IRAK 343 606 - -
Gso14g1811 642 MobiDBLite consensus disorder prediction 610 626 - -
Gso14g1811 642 ProSiteProfiles Protein kinase domain profile. 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1811 642 Gene3D Ribonuclease Inhibitor 182 229 IPR032675 -
Gso14g1811 642 Gene3D Ribonuclease Inhibitor 34 181 IPR032675 -
Gso14g1811 642 Gene3D Phosphorylase Kinase; domain 1 313 411 - -
Gso14g1811 642 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Gso14g1811 642 MobiDBLite consensus disorder prediction 272 313 - -
Gso14g1811 642 SUPERFAMILY Protein kinase-like (PK-like) 341 601 IPR011009 -
Gso14g1811 642 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Gso14g1811 642 SUPERFAMILY L domain-like 47 212 - -
Gso14g1811 642 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Gso14g1811 642 Gene3D Transferase(Phosphotransferase) domain 1 412 632 - -
Gso14g1811 642 PANTHER INACTIVE RECEPTOR KINASE-RELATED 9 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1811 Gso-Chr14 50481250 50484573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1811 25 606 Receptor kinase-like Gene Family AT1G48480 57.649 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso14g1811 Pkinase 2.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1811 - - gmx:100801582 1183.7