Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1798 ATGGATCCTCCGATTAAGAAAAAGACATTGTCTCGTGCTAGCTTGAGTCCTCAGAGGAAAGACAAGTGCATAGTTTTTCCCCTTGTGAGGTATAATGAATTCCGGGAGCCTGTTTGCCAGGCTTGTAATGTGGTTATGTTGGAGTCTATACGTGCACACCTAGCTTCTCCGGAGCATAACGAGGTAATGGAAAAACTGAAAGCTAATGCTGCTGGATCAACTGAAGATAAGAATGCAAAGCCAGTTACTGGTACCAACAACTCTCCCAAGGCTAATCCAGAACAACCTCAAGACACAGCATGCCAACTGCCTGAATTTTCACAAGATGTGCCTAGACATGAATCACCATCTGCGCTTCCACGAGATTTTTGTGATGACAGTGGTAAAATAAGGACAAGATCTGTTTCAAAAGTAACTGAAACGATGGATCCTCCTAAAGAACAAGAACACCAGGAATCCATAGTTTCACCTTCCACAGATGAAGTTTTGACATCTTCGAAACGTGGAAGGCCACGAAAAACAAAGCCTACCAAGTTCGTAATCAACGAGAAATCCAATCCCACATCAACACCCCGAAGATCTAAAAGAATAAAGCATGTAGCAGATAAAACTGCCAACAATGTTCCCGAAGTATCTTCATCCGAGGAATTATTGAAGGTAAAATTAATTACATTACTGAAGGGACGTACTGCAGAAAATTCACAAGCAGATGGCAAAGAAGTCTCTTCAGATATTGACGCCTTAGTAATCTACAAAAGAAAAAGACTACCTCGAAAGAGGTCTTCTGGTCAAATAAGCAAGTCTCCAAAGAAAACTGCTCCTTCAGAGCCTCCATCTGCTGCAATTTCAAGCTCTACTACTGCATCACCCCCTCATCAAGATCCTCCTGCAGCTACTTCACCCAGCGCTGATGCTCCTCATATTGAAAATACAAATACTGCTGAGCCAGTATTGAGTAAAAGCCTTGTCGAAGAGGTCGAGAAGGTGAACCCTGCTCCAGCCAATGCTCAAGAACAGGTTGCTTCTAGTAAGGGTCAAGAATCTCCAGATCAAGTTGACCCAAAGGTTGATGAAGTCTCTACTGGGAACACCCCACTCGATCTAGAAGCCATTAACAAAATGATCGAAGATGACCCTTTGAGTGCTATTGAAAATATCCTGACAGGGAAGGTTTCCATTTGTTCTAAGACTCCACAATCTATCACTCAGTCAGAACAACCAAAAGTTCAAGGCTCCCCTGCAGATGTTCTGTCAAAAGAGCTAAAAGACTTAATGCAGATCTTTAGCTTAGGTGATTTTGTTACTGACTATGAACAAATGTCAAAGGTCCTACTTATTCTTGAAGAGTTGCAGAAGAATGAGAAGTTTCTTTCTCTTGAACAGCAAGCATTCATAAAGGCCTTCAGACTCTTCTTCAACAATGCTGTTACTCACCGCAAACAGTGTGATACGGCTGGAATAAAGAAAGTCGAGTTGAACCGAGCTAAAGAAGATATCCTTCTGAAACTGCAAGAAGTTAAACATACACAGGAGCAAATCACATCGACCATTTCAAATGCCAACAACAGGGTCAATGAAATATCTTCTTATATTGAACAACTTGAAGAACGGTTATCCAAACTGAAGGAAGAGAGGGAGACCTTTCAGTTGGCTATTAAGGAAGGCGAGAAACAAAGGGAGACATTGAAGAATGATAGCATCTTATGGGCTCATCAGACTAAGGACCTGGTTTTTGATCTTGCAGAGATTGAGGCCAAAGAAAAAATCCTTGGACAGCAACTTGAAACAGACAATGATGCATATGACCAATTTAAAGCATCCTTTCCTTTTTAA 1833 0.4152 MDPPIKKKTLSRASLSPQRKDKCIVFPLVRYNEFREPVCQACNVVMLESIRAHLASPEHNEVMEKLKANAAGSTEDKNAKPVTGTNNSPKANPEQPQDTACQLPEFSQDVPRHESPSALPRDFCDDSGKIRTRSVSKVTETMDPPKEQEHQESIVSPSTDEVLTSSKRGRPRKTKPTKFVINEKSNPTSTPRRSKRIKHVADKTANNVPEVSSSEELLKVKLITLLKGRTAENSQADGKEVSSDIDALVIYKRKRLPRKRSSGQISKSPKKTAPSEPPSAAISSSTTASPPHQDPPAATSPSADAPHIENTNTAEPVLSKSLVEEVEKVNPAPANAQEQVASSKGQESPDQVDPKVDEVSTGNTPLDLEAINKMIEDDPLSAIENILTGKVSICSKTPQSITQSEQPKVQGSPADVLSKELKDLMQIFSLGDFVTDYEQMSKVLLILEELQKNEKFLSLEQQAFIKAFRLFFNNAVTHRKQCDTAGIKKVELNRAKEDILLKLQEVKHTQEQITSTISNANNRVNEISSYIEQLEERLSKLKEERETFQLAIKEGEKQRETLKNDSILWAHQTKDLVFDLAEIEAKEKILGQQLETDNDAYDQFKASFPF* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1798 610 Coils Coil 517 565 - -
Gso14g1798 610 MobiDBLite consensus disorder prediction 304 318 - -
Gso14g1798 610 MobiDBLite consensus disorder prediction 70 213 - -
Gso14g1798 610 MobiDBLite consensus disorder prediction 76 104 - -
Gso14g1798 610 MobiDBLite consensus disorder prediction 115 133 - -
Gso14g1798 610 MobiDBLite consensus disorder prediction 227 363 - -
Gso14g1798 610 MobiDBLite consensus disorder prediction 335 349 - -
Gso14g1798 610 MobiDBLite consensus disorder prediction 140 154 - -
Gso14g1798 610 PANTHER UNCHARACTERIZED 1 609 IPR040050 GO:0003676|GO:0005681|GO:0008270
Gso14g1798 610 MobiDBLite consensus disorder prediction 266 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1798 Gso-Chr14 50326507 50330357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1798 1 72 C2H2 Transcription Factor Family AT3G02860 50.000 1.35e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1798 - K13104 gmx:100815983 1144.8