Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1792 ATGAAAGCTTTAGCTTTGTTAGCCATTATTGTCTTCACCCTCTTGGTAAGATCTCAAGAAGAAGAAGATTATGATGATGCTTCTGTAATGTTGGCTCTCAAGAACAGCCTGAACCCGCCGGGGTGGTCCGACCCGGACCCGTGCAAGTGGGCCCGCGTGTTATGCTCCGACGACAAACGGGTCACCCGGATCCAAATCGGGCGCCTCAACCTCCAAGGCACTCTCCCCACAACCCTCCAGAAGCTCACCCACTTAGAACATTTGGAGCTCCAATACAACAACATCTCGGGCCCACTTCCCTCCCTTAACGGCTTAACCAGCCTCCGCGTCTTCCTGGCCAGCAACAACCGCTTCTCCGCCGTCCCCGCCGACTTCTTCGCCGGCATGTCGCAGCTCCAGGCGGTGGAGATTGACAGCAACCCGTTCGAGCCGTGGGAGATTCCTCAGAGTCTCCGAAACGCTTCCGGGCTTCAGAACTTCTCCGCCAACTCGGCCAACGTCGGAGGCAGCATCCCGGAGTTCTTTGGCTCTGATGTTTTCCCCGGGTTGACCCTTTTGCACTTGGCTATGAACAACCTTGAGGGAACGTTGCCGTTGAGCTTCTCTGGGTCGCAGATTCAGTCGCTGTGGTTGAATGGACAGAAGAGTGTTAACAAGCTAGGTGGGAGTGTTGAGGTTTTGCAGAACATGACTTTCTTGACCGATGTTTGGTTGCAATCTAATGCTTTCACTGGACCCTTGCCTGATTTGTCCGGGTTGAAGAGCTTGCGAGATTTGAGTTTGAGGGATAACAGGTTTACTGGTCCTGTTCCGGTTGCTTCATTTGTGGGTCTCAAGACGCTTAAAGTTGTGAACTTGACTAATAATTTGTTTCAGGGTCCAATGCCGGTGTTTGGTGATGGGGTTGTGGTAGATAATGTTAAGGATTCCAATAGTTTTTGCTTGCCGAGTCCGGGTGATTGTGATCCTAGGGTGGATGTTCTTCTTTCTGTTGTCGGGGTTATGGGGTATCCTCCAAGGTTTGCTGAGAGTTGGAAGGGAAATGATCCCTGTGCTTATTGGATTGGGATTACTTGCAGTAATGGGTATATAACTGTTGTTAATTTTCAGAAAATGGAACTTAGTGGCGTGATATCGCCTGAGTTTGCTAAACTTAAATCCTTGCAAAGGATAGTGTTAGCTGATAACAATCTCACCGGTTCGATTCCGGAGGAGCTTGCTACTTTACCAGCGCTTACTCAATTGAATGTTGCCAATAATCAGCTTTATGGGAAGGTGCCGAGTTTTAGGAAAAATGTAGTTGTGAGTACAAATGGCAACACTGATATAGGGAAGGATAAGAGTAGTTTATCCCCTCAGGGTCTGGTGCCTCCAATGGCTCCCAATGCGAAGGGAGATAGTGGCGGGGTTTCTGGAATTGGTGGCAAAAAGTCTTCTTCTCATGTGGGAGTGATTGTGTTTTCCGTGATTGGGGCTGTGTTTGTGGTTTCAATGATTGGTTTCTTGGTTTTCTGCTTGTTTAGGATGAAGCAAAAGAAGCTGAGCAGGGTCCAGAGCCCAAATGCGCTAGTTATTCATCCTAGGCATTCTGGATCGGATAATGAGAGTGTGAAGATAACAGTTGCTGGTTCAAGTGTCAGCGTTGGTGCTGCCAGTGAAACGCGAACCGTGCCAGGCAGTGAGGCTAGTGATATTCAAATGGTTGAAGCAGGAAATATGGTCATTTCCATACAAGTTCTGAAGAATGTCACTGACAATTTCAGTGAGAAGAATGTTCTGGGACAAGGAGGTTTTGGAACGGTTTATAGAGGTGAACTCCATGATGGTACAAGAATTGCGGTGAAAAGAATGGAGTGTGGGGCAATAGCTGGGAAGGGTGCGGCAGAATTCAAGTCCGAAATTGCTGTTTTGACTAAGGTTCGCCACCGGCATCTTGTTTCCCTTCTTGGTTACTGCTTGGATGGGAATGAGAAGCTTCTTGTGTACGAGTACATGCCTCAGGGAACGTTGAGTAGGCATCTTTTTGACTGGCCAGAGGAAGGACTAGAACCACTGGAGTGGAATAGAAGATTGACAATTGCCTTAGATGTGGCAAGGGGTGTTGAGTACCTCCATGGCTTGGCCCATCAAAGCTTCATACATAGGGATTTAAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTTGCAGATTTTGGTCTTGTCCGTCTTGCTCCAGAAGGAAAAGCCTCTATAGAAACAAGAATTGCAGGAACTTTTGGATATTTGGCGCCAGAGTATGCAGTTACTGGCCGTGTGACAACTAAAGTTGATGTGTTCAGCTTTGGGGTCATATTGATGGAGCTGATAACAGGAAGAAAAGCACTTGATGAAACCCAACCCGAGGATAGCATGCACCTTGTAACATGGTTCCGCAGAATGTCCATAAACAAGGACTCATTCCGCAAGGCCATTGACTCCACAATTGAGCTCAACGAGGAAACGCTTGCTAGTATTCACACAGTAGCAGAGTTAGCCGGCCACTGCGGTGCGAGGGAGCCATATCAAAGGCCTGACATGGGTCATGCTGTCAACGTGCTTTCTTCTCTTGTGGAACTCTGGAAACCATCTGATCAGAATTCTGAAGATATATATGGAATTGACCTTGACATGTCCCTACCACAAGCACTTAAGAAGTGGCAAGCTTACGAAGGTAGAAGTCAAATGGAGTCATCTTCTTCGTCTTCGCTTCTTCCAAGCTTGGATAACACACAGACAAGTATACCTACTCGCCCTTACGGATTTGCTGATTCTTTCACATCAGCAGATGGTAGGTGA 2826 0.4756 MKALALLAIIVFTLLVRSQEEEDYDDASVMLALKNSLNPPGWSDPDPCKWARVLCSDDKRVTRIQIGRLNLQGTLPTTLQKLTHLEHLELQYNNISGPLPSLNGLTSLRVFLASNNRFSAVPADFFAGMSQLQAVEIDSNPFEPWEIPQSLRNASGLQNFSANSANVGGSIPEFFGSDVFPGLTLLHLAMNNLEGTLPLSFSGSQIQSLWLNGQKSVNKLGGSVEVLQNMTFLTDVWLQSNAFTGPLPDLSGLKSLRDLSLRDNRFTGPVPVASFVGLKTLKVVNLTNNLFQGPMPVFGDGVVVDNVKDSNSFCLPSPGDCDPRVDVLLSVVGVMGYPPRFAESWKGNDPCAYWIGITCSNGYITVVNFQKMELSGVISPEFAKLKSLQRIVLADNNLTGSIPEELATLPALTQLNVANNQLYGKVPSFRKNVVVSTNGNTDIGKDKSSLSPQGLVPPMAPNAKGDSGGVSGIGGKKSSSHVGVIVFSVIGAVFVVSMIGFLVFCLFRMKQKKLSRVQSPNALVIHPRHSGSDNESVKITVAGSSVSVGAASETRTVPGSEASDIQMVEAGNMVISIQVLKNVTDNFSEKNVLGQGGFGTVYRGELHDGTRIAVKRMECGAIAGKGAAEFKSEIAVLTKVRHRHLVSLLGYCLDGNEKLLVYEYMPQGTLSRHLFDWPEEGLEPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQPEDSMHLVTWFRRMSINKDSFRKAIDSTIELNEETLASIHTVAELAGHCGAREPYQRPDMGHAVNVLSSLVELWKPSDQNSEDIYGIDLDMSLPQALKKWQAYEGRSQMESSSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1792 941 Gene3D Phosphorylase Kinase; domain 1 547 664 - -
Gso14g1792 941 ProSitePatterns Protein kinases ATP-binding region signature. 593 625 IPR017441 GO:0005524
Gso14g1792 941 PANTHER RECEPTOR PROTEIN KINASE TMK1 6 941 - -
Gso14g1792 941 Gene3D Transferase(Phosphotransferase) domain 1 665 885 - -
Gso14g1792 941 PANTHER OSJNBA0070M12.3 PROTEIN 6 941 - -
Gso14g1792 941 SUPERFAMILY Protein kinase-like (PK-like) 563 871 IPR011009 -
Gso14g1792 941 SMART serkin_6 587 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1792 941 MobiDBLite consensus disorder prediction 905 930 - -
Gso14g1792 941 Pfam Leucine rich repeat N-terminal domain 25 56 IPR013210 -
Gso14g1792 941 Pfam Leucine rich repeat N-terminal domain 325 360 IPR013210 -
Gso14g1792 941 SMART LRR_typ_2 105 128 IPR003591 -
Gso14g1792 941 SMART LRR_typ_2 82 104 IPR003591 -
Gso14g1792 941 SMART LRR_typ_2 253 277 IPR003591 -
Gso14g1792 941 SMART LRR_typ_2 180 203 IPR003591 -
Gso14g1792 941 SMART LRR_typ_2 385 409 IPR003591 -
Gso14g1792 941 CDD STKc_IRAK 593 866 - -
Gso14g1792 941 ProSiteProfiles Leucine-rich repeat profile. 84 106 IPR001611 GO:0005515
Gso14g1792 941 Gene3D Ribonuclease Inhibitor 323 447 IPR032675 -
Gso14g1792 941 Pfam Protein tyrosine and serine/threonine kinase 590 816 IPR001245 GO:0004672|GO:0006468
Gso14g1792 941 Pfam Leucine rich repeat 381 422 IPR001611 GO:0005515
Gso14g1792 941 MobiDBLite consensus disorder prediction 905 941 - -
Gso14g1792 941 ProSiteProfiles Protein kinase domain profile. 587 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1792 941 Gene3D Ribonuclease Inhibitor 23 321 IPR032675 -
Gso14g1792 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Gso14g1792 941 SUPERFAMILY L domain-like 55 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1792 Gso-Chr14 50249455 50253615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1792 456 876 Trihelix Transcription Factor Family AT1G70460 37.727 1.79e-79 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gso14g1792 PK_Tyr_Ser-Thr 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1792 - K00924 gmx:100305404 1829.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1792 14 50249455 50253615 Gso2g2068 2 45284420 45288479 GST