Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1791 ATGAAACCAAACTTTGATCTTGAAGTGGAGGCATGTGCAGAATATGAATCTGAGGTTAGCAGCCAGGTTGCTTCCAATGTATCTATTCAAGAAACCTCTATAGGTCCGTGTAGTGATAGCCTCACCAACATTTCCAACATCACAAATCCAATAGGGATTCATCCTAATTCTGATGCTATTTCACTTGACTTAAGTCTCAACTTCAAGAATAGTGAGCCAGGGGGAAGAGATTCAATAGGATTCTCATTCTCAAGCACTAGTGAGAGCAGCAATGAACCTGCCTCTCAAACTACAGCAGCAACCATTCCACGAGTCTTCTCTTGCAATTACTGCCAGCGCAAGTTTTTCAGTTCTCAGGCTCTTGGTGGACACCAGAATGCACACAAGAGAGAAAGGACATTAGCAAAAAGGGCCATGAGAATGGGGTTTTTCTCTGAAAGGTATGCCAATTTAGCATCTCTCCCTCTGCATGGTTCTTTCAGGTCCTTGGGAATAAAGGCGCACTCCTCACTGCACCATGGTTTCTTACCAACAATGAGGCCTCCTGAGATAAAGAGCAATGCAAGATATGATCAAGGGTATCTTGGCCACCCGATATTCTTGGAGGATGACGAGTCAGATTTGTTGTGGCCTGGTAGTTTTCGTCAAGTTGCCGAGGCAGGTGATAGTCATCAGAATTTCATACTGACTGGAAGTTCTAATATGAGTTTTACTGAGGTGAACCCACCTGTAGACATAGAGAACTCAACACCAGATTTGACTTTGAAACTTTGA 774 0.4354 MKPNFDLEVEACAEYESEVSSQVASNVSIQETSIGPCSDSLTNISNITNPIGIHPNSDAISLDLSLNFKNSEPGGRDSIGFSFSSTSESSNEPASQTTAATIPRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSERYANLASLPLHGSFRSLGIKAHSSLHHGFLPTMRPPEIKSNARYDQGYLGHPIFLEDDESDLLWPGSFRQVAEAGDSHQNFILTGSSNMSFTEVNPPVDIENSTPDLTLKL* 258
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1791 257 PANTHER ZINC FINGER PROTEIN 3-RELATED 1 257 - -
Gso14g1791 257 MobiDBLite consensus disorder prediction 79 98 - -
Gso14g1791 257 Gene3D Classic Zinc Finger 84 151 - -
Gso14g1791 257 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
Gso14g1791 257 SUPERFAMILY beta-beta-alpha zinc fingers 104 133 IPR036236 -
Gso14g1791 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Gso14g1791 257 PANTHER ZINC FINGER PROTEIN JAGGED 1 257 IPR045320 GO:0003700
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso14g1791 Gso-Chr14 50222777 50225927 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1791 88 257 C2H2 Transcription Factor Family AT1G66140 51.531 1.24e-52 170
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso14g1791 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1791 - - gmx:100794851 509.99
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1791 14 50222777 50225927 Gso2g2066 2 45263531 45267206 GST
Gso18g0374 18 3650007 3653352 Gso14g1791 14 50222777 50225927 PCT
Gso13g1242 13 27534443 27537920 Gso14g1791 14 50222777 50225927 PCT
Gso14g1791 14 50222777 50225927 Gso18g0374 18 3650007 3653352 PCT
Gso14g1791 14 50222777 50225927 Gso13g1242 13 27534443 27537920 PCT