Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1790 ATGACCTTGGAGGGGATTTTCATTGAGCCCACCTCAACCACTACTGCTCCTGATCTTTCTCTTCACATAAGCCCCCCAACCATCTCTTCCTTGAATTCCAATTATGAACCCCATGAAAGTAATTTCCCTTCAAGAACTACTACTGTGTCTCAACAAGCCCACACAGAACTCTCTCTTGGAAGAAATTTCACTTCTGAAACACCAATACCAACACCACACAACCCTTATTATCAAAGCCAAAACCATTTCCATCATCTTCACCACCACCACCACAACAACAACAACACTAGTACTAGTGTTAATACAACAAGTGTTGTTACAAGTACTACCAGTACTACTCCCTTGAATCACATAAACTATGGAGTTTCATTGCTTGATGTGTCATCATCAGACACCTTGAGGCCAATCAAGGGGATTCCTGTGTATCACAACCGTTCATTCCCTTTTGTGGCGACCATGGACCATGCTAGAGACAACTTAAACAACAACAACAACAACAACAAGGATCATTACCATCACCACAAGATGTGCTTATATAATCATCACAACATGCCTTCTTATCCCTCTCTCTCTTCCTCCACAGCTACTCCTTCTCCTTCACCTTACTTTGTGGATCCCATGTCCCTCTTGAACAACGGCTCCACCATGGCGGCGTGTAGGGCTGCCACGGCCACAAGGTTTAATGGGTTCTCCGGCGATGCTTTCAAATCTCATCATCCATTGCACCAATATGGGGTCGGCCCTTCAGAAGCCTCTTCTGGGTTCATGAGATCAAGGTTTCTGCAGAAGCTTCCCAACAAGAGGAGCATGAGAGCACCCAGAATGAGGTGGACAAGCACCCTCCATGCGAGATTTGTTCATGCGGTTGAACTTCTTGGTGGCCATGAAAGAGCTACTCCAAAATCAGTTCTTGAGCTCATGGATGTGAAGGATCTAACACTAGCTCATGTGAAGAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCGGCATCTTCAGGCCATTCAGATGGGTCTGGAGAGGATGATTTGTCTCCGATGGTTAGCACCGCCGATCGTGGTGGTCTCCGACAATTTCCCAACCACAGAGGGCGGCCGGAGTGGGCGGCACAACAAGACATGGACTACTCTTCCACCACCACTACTCTATGGAGTAATTCTTCAAGTTGTGGGGAGTCACGGCTAAGACCTAGTTCTAACGACATAGATGGTCTCAGATCACCTATCCTCCATTCACAAACAATATCAGGAGGGCATCAAATTCAGGAGTGTGATTCAATCCAACTCAAGAGCAACATGCCAGGTTCTAATTTGGAGTGCAAGATCCCAAGCTTGGAATTCACGTTAGGAAGACCAGATTGGGATGGCAAAGAACAAGCCTAG 1395 0.4645 MTLEGIFIEPTSTTTAPDLSLHISPPTISSLNSNYEPHESNFPSRTTTVSQQAHTELSLGRNFTSETPIPTPHNPYYQSQNHFHHLHHHHHNNNNTSTSVNTTSVVTSTTSTTPLNHINYGVSLLDVSSSDTLRPIKGIPVYHNRSFPFVATMDHARDNLNNNNNNNKDHYHHHKMCLYNHHNMPSYPSLSSSTATPSPSPYFVDPMSLLNNGSTMAACRAATATRFNGFSGDAFKSHHPLHQYGVGPSEASSGFMRSRFLQKLPNKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDLSPMVSTADRGGLRQFPNHRGRPEWAAQQDMDYSSTTTTLWSNSSSCGESRLRPSSNDIDGLRSPILHSQTISGGHQIQECDSIQLKSNMPGSNLECKIPSLEFTLGRPDWDGKEQA* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1790 464 SUPERFAMILY Homeodomain-like 270 326 IPR009057 -
Gso14g1790 464 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 273 326 IPR006447 GO:0003677
Gso14g1790 464 MobiDBLite consensus disorder prediction 329 409 - -
Gso14g1790 464 Gene3D - 272 329 - -
Gso14g1790 464 MobiDBLite consensus disorder prediction 376 400 - -
Gso14g1790 464 PANTHER TRANSCRIPTION REPRESSOR KAN1 1 463 - -
Gso14g1790 464 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 463 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1790 Gso-Chr14 50209913 50216611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1790 1 461 G2-like Transcription Factor Family AT5G16560 40.408 3.70e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso14g1790 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1790 - - gmx:100812229 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1790 14 50209913 50216611 Gso2g2063 2 45243901 45250538 GST