Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1782 ATGGTTCTGTCGAAAACCGCGTCGGAGAAAGACGTCTCTATTCATTCCACCTTCGCCTCTCGCTATGTCCGCACCTCTCTTCCCAGGTTCAAGATGGCGGAGCAATCGGTTCCGAAGGAAGCGGCGTACCAAATCATAAACGACGAGCTAATGCTAGACGGGAATCCGAGGCTGAACCTGGCGTCGTTCGTGACGACGTGGATGGAGCCTGAATGTGACAAACTCATCATGGCTGCCATTAACAAAAACTACGTCGACATGGATGAGTATCCTGTCACCACTGAACTCCAGAACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCACCACTCGAAGAGTCAGAAATTGCAGTTGGTGTTGGCACGGTTGGCTCATCAGAGGCCATAATGTTGGCTGGGTTGGCATTCAAAAGGAGGTGGCAGAATAGAAGGAAACAAGAAGGGAAGCCTTATGACAATCCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGCTGAAAGAGGTGAAGCTGCGTGATGGATACTATGTAATGGACCCTGAAAAAGCAGTGGAAATGGTGGATGATAACACCATTTGTGTTGCTGCTATCCTTGGTTCCACTCTGAATGGAGAGTTTGAAGATGTCAAACTTTTAAATGATCTCCTGGTGGAAAAGAATAAGGAAACTGGATGGGACACTCCAATTCATGTGGATGCAGCCAGTGGTGGATTCATTGCACCTTTTCTCTATCCTGAGCTTGAGTGGGATTTTCGGTTGCCACTAGTGAAGAGCATCAATGTTAGTGGACACAAATATGGTCTAGTCTATGCTGGAATTGGTTGGGTCATTTGGAGAAGCAAGGAAGACCTTCCTGAGGAACTCATTTTCCACATTAACTATCTAGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCTCAGTACTACCAACTAATTCGACTGGGTTATGAGGGATATAAAATGGTGATGGAAAACTGCAGAGACAACATGACAGTGCTTAAGGAAGGACTGGAGAAAACAGGAAGGTTTGAGATTGTATCCAAAGACATTGGTGTTCCATTGGTGGCATTCACTTTGAAAGACCACACCCACTTCAATGAATTCCAAATCTCTGATATGCTGAGGCGCTATGGTTGGATAGTGCCAGCATACACAATGCCCCCAGATGCACAACATGTGACAGTGCTCCGTGTTGTGATTAGGGAGGACTTTTCTCGCACCCTCGCGGAGCGTCTTGTGATTGATGTCACCAAAGTGTTGCACGAACTGGATTTGCTTCCAGCTAGGGTGATCAGCACCAACACCATAACGGTTACTGGTGAATCAGGTGAAGAAAATGAGGAAAAAGTGCTGTTTGCCAAGAAGAGTGAAATAGAGACACAAAGGGAAATCACTTCAGTTTGGAAGAAGTTTGTGATGGAGAGGAAGAAGATGAATGGTGTTTGTTAG 1512 0.4597 MVLSKTASEKDVSIHSTFASRYVRTSLPRFKMAEQSVPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEESEIAVGVGTVGSSEAIMLAGLAFKRRWQNRRKQEGKPYDNPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDDNTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKMVMENCRDNMTVLKEGLEKTGRFEIVSKDIGVPLVAFTLKDHTHFNEFQISDMLRRYGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVIDVTKVLHELDLLPARVISTNTITVTGESGEENEEKVLFAKKSEIETQREITSVWKKFVMERKKMNGVC* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1782 503 Gene3D - 66 360 IPR015421 GO:0003824
Gso14g1782 503 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Gso14g1782 503 Gene3D - 361 448 - -
Gso14g1782 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gso14g1782 503 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gso14g1782 503 Pfam Pyridoxal-dependent decarboxylase conserved domain 39 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gso14g1782 503 Gene3D - 1 65 - -
Gso14g1782 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1782 Gso-Chr14 50116447 50121902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1782 1 503 Calmodulin-binding Proteins AT5G17330 84.325 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1782 K01580 - gmx:100791696 1011.13