Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1763 ATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACATGAAGGAGGGGAGAAGAAGTGTTTGAATTCTGAGCTATGGCATGCATGCGCGGGTCCCTTGGTGTCCCTACCAACTGCAGGGACTCGTGTGGTTTATTTCCCTCAGGGTCATAGCGAGCAGGTTGCTGCCACAACCAACAGAGAAGTTGATGGTCACATACCCAATTACCCGAGTTTGCCGCCACAGTTGGTTTGCCAACTTCACAATGTTACAATGCATGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACGTTGCAGCCATTGACTCCGCAAGAGCAGAAGGATACATTTCTTCCCATGGAGTTGGGCGTTCCAAGTAAGCAGCCCTCAAATTATTTTTGCAAGACGTTAACGGCAAGTGACACCAGCACACATGGAGGGTTCTCTGTTCCTCGTCGTGCTGCTGAGAAAGTTTTCCCTCCATTGGATTTCTCACAGCAACCACCTGCGCAAGAACTAATTGCTAGGGATCTCCATGACGTTGAGTGGAAGTTTCGACATATTTTTCGAGGACAGCCAAAACGACACCTTCTTACAACAGGCTGGAGTGTATTTGTTAGTGCCAAAAGACTAGTGGCTGGAGATTCTGTGCTTTTCATATGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCGTGCCAATCGACCACAAACTGTCATGCCATCGTCAGTTCTATCTAGTGATAGTATGCACATTGGGCTTCTTGCAGCTGCTGCTCATGCCGCAGCAACTAATAGCTGCTTTACAGTGTTCTATAACCCAAGGGCTAGTCCATCTGAGTTTGTCATTCCGCTTTCAAAATATATCAAAGCTGTGTACCATACACGCGTTTCTGTTGGTATGCGTTTCAGGATGCTTTTTGAGACTGAAGAATCAAGTGTCCGCAGGTACATGGGTACAATAACTGGCATAAGTGACCTTGATCCTGTTCGTTGGCCGAATTCTCATTGGCGGTCTGTTAAGGTTGGTTGGGATGAATCGACAGCAGGAGAGAGACAGCCTCGGGTATCATTATGGGAAATTGAGCCTTTAACAACATTTCCAATGTATCCATCTCTATTTCCCCTCAGATTGAAACGGCCATGGCATCCTGGCACCTCTTCTTTTCATGATGGCAGAGATGAAGCAACTAATGGGCTTATGTGGCTAAGGGGTGGACCTGGAGACCAAGCTCTCAATTCCCTGAATTTTCAAGGTTCTGGTTTGTTGCCATGGATGCAGCAGAGAATGGATCCAACATTACTTGGAAATGATCATAATCAGCAATACCAAGCCATGTTTGCATCTGGTTTGCAGAACTTAGGGAGTGGAGATTTAATGAGACAACAAATGATGAATTTTCAACAGCCTTTCAATTATCTTCAACAATCAGGAAACCCCAATCTTCCTTTGCAGCTTCAGCAACCGCAAGCAGTTCAGCAATCTGTATCTTCTAATAATATCCTACAGCCACAAGCCCAAGTGTTGGCAGAGAACTTGTCTCAGCACCTCCAGAAATCACACAACAATCGAGAAGACCAAACACAGCAGCAGCAGCACACTTATCAAGATACGGTTTTACTTCAAAGTGATCAGCTCCATCAGAGGCAACACTCTGGTTTACCTTCACCGTCATATTCAAAACCGGATTTCTTAGATTCAAGCATGAAGTTCCCTGCTTCAGTTTCGCCAGGACAAAACATGCTTGGTTCACTTTGTCCCGAAGGGAGTGGCAATCTCTTGAATTTATCCAGAAGTAGTCAGTCCATGTTGACTGAACAGTTACCTCAACAATCATGGGCCCCAAAGTTCACACCATTGCAGATTAATGCTTTTGGCAACTCAATGCAACATGTGCAGTATTCTGGAAAAGATACTGCAATGGTGCCACCACATTGTAACCCAGACTCCCAAAATCCTATTCTATTTGGGGTCAACATTGATTCATCTGGCCTTCTGCTTCCTACGACTGTTCCTCGTTATACTACTGCATCAGCTGAAATTGATGCATCAGCAATGCCAATAGGAGAGTCTGGATTCCAGTCTCCTCTATATCCTTGCGTGCAAGATTCATCAGAGTTGGTGCAAAGTGCAGGGCAAGTCGACCCTCAAAACCAGACACGAACATTCGTCAAGGTTTACAAATCAGGGTCAGTAGGGCGCTCACTTGACATCTCCCGGTTCAGCAGTTATCATGAGCTGCGGGAGGAGTTGGCACAGATGTTTGGTATTGAGGGGAAATTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTTGACAGGGAGAACGATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCATTTGTCAATAATGTATGGTATATCAAAATACTTTCACCTGAAGATATCCATAAAATGGGAGAACAAGCCGTGGAATCCCTTGGTCCAAGTTCAGGACATAGGCTGAATAGCACTGGTGCAGATTCTCACGAAATTGTTTCTGGACTTCCATCAATTGGCTCCCTTGAATACTGA 2532 0.453 MKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLVCQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFHDGRDEATNGLMWLRGGPGDQALNSLNFQGSGLLPWMQQRMDPTLLGNDHNQQYQAMFASGLQNLGSGDLMRQQMMNFQQPFNYLQQSGNPNLPLQLQQPQAVQQSVSSNNILQPQAQVLAENLSQHLQKSHNNREDQTQQQQHTYQDTVLLQSDQLHQRQHSGLPSPSYSKPDFLDSSMKFPASVSPGQNMLGSLCPEGSGNLLNLSRSSQSMLTEQLPQQSWAPKFTPLQINAFGNSMQHVQYSGKDTAMVPPHCNPDSQNPILFGVNIDSSGLLLPTTVPRYTTASAEIDASAMPIGESGFQSPLYPCVQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIHKMGEQAVESLGPSSGHRLNSTGADSHEIVSGLPSIGSLEY* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1763 843 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Gso14g1763 843 MobiDBLite consensus disorder prediction 542 561 - -
Gso14g1763 843 SUPERFAMILY DNA-binding pseudobarrel domain 112 257 IPR015300 -
Gso14g1763 843 SMART B3_2 128 230 IPR003340 GO:0003677
Gso14g1763 843 MobiDBLite consensus disorder prediction 542 559 - -
Gso14g1763 843 CDD B3_DNA 127 228 IPR003340 GO:0003677
Gso14g1763 843 Pfam AUX/IAA family 713 801 IPR033389 -
Gso14g1763 843 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gso14g1763 843 Gene3D - 713 806 - -
Gso14g1763 843 Coils Coil 506 526 - -
Gso14g1763 843 ProSiteProfiles PB1 domain profile. 717 801 IPR000270 GO:0005515
Gso14g1763 843 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Gso14g1763 843 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 828 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gso14g1763 843 Gene3D - 292 364 - -
Gso14g1763 843 SUPERFAMILY CAD & PB1 domains 715 791 - -
Gso14g1763 843 Gene3D - 126 229 IPR015300 -
Gso14g1763 843 PANTHER AUXIN RESPONSE FACTOR 1 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1763 Gso-Chr14 49909512 49917803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1763 98 814 B3 DNA Binding Superfamily AT5G37020 67.995 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gso14g1763 AUX_IAA 7.1e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1763 - - gmx:100784804 1654.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1763 14 49909512 49917803 Gso2g2038 2 44988234 44999250 GST
Gso18g0417 18 4154198 4161702 Gso14g1763 14 49909512 49917803 PCT
Gso14g1763 14 49909512 49917803 Gso18g0417 18 4154198 4161702 PCT