Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1750 ATGCTCGCTGCTGCTGCTTCAGCTTCTCGGCACCTTCTTCAACGCGATGCCAGCATCGGTGCTTGCAGTGGCAGTGGCAATCGAGTTCGCTCTCTTTTGACTGCTTCTGCCATCACCACAACCTACCCAATTCGCATTAGAAAATGTTACAGTAACGGTTATGGAATTAGTTTCAATAACCCCAAACACAGAACGTGCCCAAGTTTGCTTTTTGCTGTAAAAGGGTTCCTCTCTGATTCATCAAATTCTAATTCCCCACATGGCAGAGTTACCAGACCTTACTTACCACACCCTGTTAATAGTTCAAATGTGGATGGGCGAGCGTTGTTCTCAACTTCAACTAAAACTGATGATGGAAGTCAGAGCCAAAAGGCTGCTGCTTCCACCATTGGTAAATCATCACCACCACCGCCACCTGGTGGGCAAGCTGCTGATGTGAAGATCCTTGGCACGCTTGCCAGTTACTTGTGGATGAAAGATAATCTTGAATTTCGGGTTCGGATTGTTGCTGCATTGGGTTTGCTTGTTGGGGCTAAGATTTTGAATGTTCAGGTGCCTTTCTTGTTCAAGCTTGCCGTTGATTCGTTGACAGCTGGCACGGGGAGTATGGGTGCTCTTGCTTCGAATTCAAGCGGGTTGGTTCTTTTCGCAACCCCTGTTGCAGTGTTGATTGGTTATGGGATTGCACGTTCAGGAGCTTCTGCTTTCAATGAACTGCGGACTGCTGTATTTGCTAAAGTTGCACTGCGAACAATTCGATTAGTATCAAGGAAGGTCTTCTCACATTTGCATGACCTAGACCTTCGGTATCATCTAAGTCGAGAAACTGGTGCATTAAGTAGAATAATTGATCGTGGTAGTCGTGGAATAAATTTCATTCTCTCCTCTATGGTGTTCAATGTAGTACCCACCATATTAGAGATATCTATGGTAGCAGGTATACTGGCCTACAAATTTGGAGCTCCCTTTGCACTGATTACTTCCTTATCAGTTGCTGCTTATGTTGCTTTTACACTGACTATCACACAGTGGAGGACTAAGTTCAGGAAAGCCATGAATAAGGCGGATAATGATGCTGGTACAAGGGTTATTGATTCACTTATTAATTATGAGACTGTGAAATATTTTAATAATGAAGTTTATGAAGCTGATAACTATGACAAGTACCTAAAGAGGTATGAGGATGCTGCTCTGAAAACCCAACGCAGTCTTGCTTTGTTGAACTTTGGTCAAAATGTTATATTTAGTACTGCTCTTTCATCGGCAATGGTTCTTTGCTCTCATGGGATCATGGATGGCACAATGACTGTTGGTGATTTGGTAATGGTGAATGGGCTTCTCTTCCAACTATCTCTTCCACTCAATTTCCTTGGTAGTGTTTATCGTGAGACTATTCAGAGTCTAGTTGACATGAAGTCCATGTTTCAGTTACTTGAGGAAAGAGCAGATATTAGGGATAAAGAAAATGCAAAGCCTCTGAAATTTAACGGGGGAAGAATCCAATTTGAGAATGTACATTTTAGTTACCTCACAGAAAGAAAGATACTAGATGGAATATCATTTGTTGTGCCAGCTGGTAAAAGTGTTGCAATTGTTGGGACTAGTGGAAGTGGAAAATCAACCATTCTTAGATTGCTATTCAGATTCTTTGATCCTCATTCTGGAAGTATAAAGATAGATGATCAAAATATTCGGGAGGTAACCCTTGAGAGTTTGCGGAAGTCCATTGGTGTTGTTCCACAAGATACTGTACTTTTCAATGATACAATATTTCATAACATTCACTATGGTCGGCTATCAGCAACAAAAGAGGAGGTCTATGAAGCTGCTCAACAAGCAGCAATTCATAACACTATCATGAATTTTCCTGATAAATATTCAACTGTTGTGGGAGAGCGAGGACTAAAGTTAAGTGGTGGTGAGAAGCAACGTGTTGCCCTAGCTCGTGCGTTCTTAAAAGCACCTGCAATACTGTTGTGTGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTAAAGTCAGTAGCAAATAATCGGACTTCCATATTCATTGCTCACAGGCTTACCACAGCAATGCAGTGTGACGAGATCATTGTTTTGGAAAATGGGAAGGTGATTGAGCAAGGACCCCATGAAGTGCTCTTATCAAAAGCAGGAAGATATGCACAGCTGTGGGGACAGCAAAATAACACTGTTGATGCAATTGATACAGCCATCAAGCTAGAAGCATAA 2253 0.4199 MLAAAASASRHLLQRDASIGACSGSGNRVRSLLTASAITTTYPIRIRKCYSNGYGISFNNPKHRTCPSLLFAVKGFLSDSSNSNSPHGRVTRPYLPHPVNSSNVDGRALFSTSTKTDDGSQSQKAAASTIGKSSPPPPPGGQAADVKILGTLASYLWMKDNLEFRVRIVAALGLLVGAKILNVQVPFLFKLAVDSLTAGTGSMGALASNSSGLVLFATPVAVLIGYGIARSGASAFNELRTAVFAKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRIIDRGSRGINFILSSMVFNVVPTILEISMVAGILAYKFGAPFALITSLSVAAYVAFTLTITQWRTKFRKAMNKADNDAGTRVIDSLINYETVKYFNNEVYEADNYDKYLKRYEDAALKTQRSLALLNFGQNVIFSTALSSAMVLCSHGIMDGTMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADIRDKENAKPLKFNGGRIQFENVHFSYLTERKILDGISFVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSGSIKIDDQNIREVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYEAAQQAAIHNTIMNFPDKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEAEILSALKSVANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGPHEVLLSKAGRYAQLWGQQNNTVDAIDTAIKLEA* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1750 750 MobiDBLite consensus disorder prediction 104 130 - -
Gso14g1750 750 CDD ABCC_ATM1_transporter 500 735 - -
Gso14g1750 750 Gene3D - 491 747 IPR027417 -
Gso14g1750 750 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 169 466 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso14g1750 750 Pfam ABC transporter transmembrane region 171 453 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso14g1750 750 SMART AAA_5 525 711 IPR003593 -
Gso14g1750 750 SUPERFAMILY ABC transporter transmembrane region 163 479 IPR036640 GO:0005524|GO:0016021
Gso14g1750 750 PANTHER ABC TRANSPORTER OF THE MITOCHONDRION 1-RELATED 138 741 - -
Gso14g1750 750 CDD ABC_6TM_ATM1_ABCB7 171 474 - -
Gso14g1750 750 Gene3D ABC transporter type 1, transmembrane domain 155 490 IPR036640 GO:0005524|GO:0016021
Gso14g1750 750 MobiDBLite consensus disorder prediction 81 143 - -
Gso14g1750 750 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 500 734 IPR003439 GO:0005524
Gso14g1750 750 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 138 741 IPR039421 -
Gso14g1750 750 Pfam ABC transporter 516 665 IPR003439 GO:0005524
Gso14g1750 750 ProSitePatterns ABC transporters family signature. 637 651 IPR017871 GO:0005524
Gso14g1750 750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 735 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1750 Gso-Chr14 49799117 49817669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1750 323 736 Calmodulin-binding Proteins AT2G36910 36.279 4.88e-64 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1750 K05662 - gmx:100779975 1441.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1750 14 49799117 49817669 Gso2g2026 2 44846728 44865166 GST