Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1742 ATGGGGGAGATCGTTGTTTCCATCATAGCAAAGATTGCAGAATATACAGTGGGTCCAATTTTACACCATGCTCGATACTTGTGTTGTTTCAACAACTTTGCTGGGAATCTTCCAAATGCAAAAGAAGATTTGGAATTGACTCGAGACAGTGTAAAGAAACGAGTAAGAGAAGCCACTAACAGGACTGAAAAAATCGAACCAGCAGTTGAGAAGTGGCTGAAAGATGTTGAGAAAGTCTTACAAGAAGTGCAGACACTAGAAGGAAGGATTTTGGAAGTACGCAAAAGTATTTTCCGAAGTCAATGCCAATATTTCCTTGCAAAAGAAATCGCAAGAAAAATAGAAAAAATGACTCAGCTCAATCGTGATAGCAAGTTTGACCCATTTTCTAGCAAGACTGAACTTCCAGGCATGAAATATCATTCTTTCGAAGATTTTGTTCCTTTCAAATCTACAGAATCGACTTATAATGAGATTTTGGAAGAGTTAAGTGATAAAAGTTTTATTATGATTGGACTACATGGAATGGGAGGGTCGGGAAAAACAACTTTGGTGAAAGAGGTGGGTAAGAAAGTTGAGGAGTTAAAACTTTTTGAGAAGGTTGTGATGGCAGTGGTCTCTCAAACTCCAAATATTAGAAGCATCCAAGAGCAAATTGCTGATAAGTTGGGTTTGAAATTTGAGGAAAATTCAGAGGAAGGTAGAGCACAAAGACTTTCAAAAAGATTAAGTGAAGGCAAAACTCTTCTAATCTTGGATGATGTATGGGAAAAGTTAAATTTTGAAGCTATAGGTATTCCATTCAATGAAAACAACAAGGGTTGTGGAGTACTTCTAACAACTCGAAGCAGAGAAGTATGTACTTCTATGCAATGCCAAAGTATAATTGAGCTCCATCTCTTAACTGACGAGGAAGCCTGGGATTTGTTCCAATTTTATGCCAAAATAACTGATGACTCCTCAGCTGCTTTAAAAGGTGTGGCAACAAAAATTGTTAATCAATGTAAGGGATTGCCTATTGCTATTGTGACATTAGGAAGCACACTAAGGGGGAAAACTTTAGAAGAGTGGGAGTTGGCATTGTTAAGACTGGAAGATTCTAAACCATTGGATATTCCAAAAGGCTTAACAAGTCCTCATGTTTGTCTTAGATCAAGTTATGATAATTTGACAAATCAATTAGCGAAATCCTTATTATTGTTGTGTTCTATATTTCCAGAGGATCACGAAATTGATTTGGAAGATTTATTTCGATTTGGAAGAGGATGGGGCCTAATTGGGACTTTTGGAACTTTGGAGAAATCAAGAAAGGAGATGCATGTAGCTATTAATATCCTCAGGGATTCTTGTTTGTTGTTGCATACCAAAATTAAAGAAAAGGTGAAAATGCATGACCTGGTTCGTGATGTAGCCTTGTGGATAGCATCTGAAAGCGATCGAGAAATTTTGGCAGGTGCTGCAATGGATCCAACAATCTTGGTACAGGGTGGTAACATAAAAGATAAGAAAGCAATATCCTTATGGAATTGGCGAAATGGTCAGCTTCCTGATGATCAATTGAATTGTCCCAGACTTGAAATTCTCTTGCTTCATTCTCTATATGATGGCTTTGAAGTATCAAATGCGTGTCTTGAAAGGTTGAAAATGCTCAAAATCCTAGCATTCTTAGGATCTGGTTACGAGTGGATTGCAGATTATGCTGAAAGAAGTAAAACTTTGTTACTGCCACAGTCATTTGAGTCATTAAAAAATCTTCATACTCTGTGCTTGAGAGGTTATAAATTAGGTGACATCTCCATTTTGGAAAGCCTACAAGCACTTGAGATTCTTGACTTGCGTTGGTCTTCTTTTGAAGAATTGCCTAATGGAATTGTAGCATTAAAGAATTTGAAGCTTTTAGATTTGTTCTGCTGTAAGATTGAGAAAGATAATGCTTACGAGGTTATTGGGGAATGTTTGCAGCTAGAGGAATTGTATTTGTATTTACTCCAATCTAAAAAGAACTTTCCACAAAATGCCATATTCTCAAGATTGCGAAGGTATGTTATAATACAATTTACTAAAGAATCTGATCGATACTTCTTCTTCTTCCAGTGGTCTTACTTTTTTAGAAAACAGAGACCATCAAGAGTTTTATGCATAGAAGGTTTTAATGCCTCAGTTCAAAGTTTTATATCATTACCAATCAAGGATTTCTTTCAAAAAGCAGAGTACCTTGAATTGAGGCACCTTAAGGGAGGTTACAAAAATGTAATCCCATCCATGGATCCACAAGGCATGAATCACTTGATTTTCCTAATCCTCGAATATTGTCCAGAGATAAAATGCGTCTTTGATGGTACCACAATGCAAACTGAAGATGCGTTCTCCAGCCTAGTCATTTTACGCTTGTATGAATTGGATAACCTTGAAGAAGTGTTTCATGACCCCTCTTCCAGATGCTCTCTCAAAAGTTTAGAAGAGCTAACCCTAGAGAGTTGTAGACAATTGTACAATATTTCCTTTCCCAAGAACTCAAAGCTATGCCATCTCAAGTCCTTGAGAATATATAATTGCCCGATGCTAACTTGTATCTTCTACCCATCCATTGTCCAAACTCTAGAGCTGCTAGAAGAAGTGAGAATATCTGAATGCTATGAATTGAAGCAGATGATAGAAGAAGTGGAAGAAGGGAGTGTTGATTATGTTAGCAGTCAAAGTCATACCTCTTTGATGCTCCCAAAATTAAGGACACTTACTATTCATGGATGTCGCAGCTTGAAATATATATTCCCTATGTGTTATGCTCATGGGCTAGCAAGTTTGGAAAAACTTGACATTGGATTTTGTGATAAGTTGAAGTATGTATTTGGCAGTGAAAAGGAACATGATCTTAGAGTGTACCAGCACCAGAGTCATCCTCAGACTAATATTCACATCAATTTGGGAGCTCTATGGTTGAATGACTTGCCGAATTTGGTTGAGATTTGGCCTAAATATTTTGATCCACATTTACCAAATTTGAAAGAGCTACGATGCTATTATTGTCCAAGACTGCCTGACTCTTGGGTGCGTAGGGTGATGATTATTGATTCAGATCTGCAACAAGACTCAACTGCAACGGAGAAGGAATTACTATGCTCGGTTACCACCACATTCAACCAATTATCCGATCAAGTGCTTTCTTCTAAACTTACACATCTTCAATTGCATGGTCTTGGAGTAAAAGGTCTTTTCCAATTCCAAATCAGAGAACATGGGAGCAACAGAGAACTTGCTCCTTTAAACTTGGATCTAATTTATGCTGAATTGAGTGATCTACCTGAGCTCGAGTTCATATGGAAGGGCCCCACAAATTTTCTAAGCCTCCATATGCTTAAGTGGATTTTTGTGCTTGAATGTCCAAAATTGAAAACCATCTTCTCCCCTACCATTGTTAGAAGCTTACCAATGCTGAGATCACTGCATATAATTGATTGTGAGAAATTGGAACAAATATTTGATTCAGGTGATGCACAAAGCCTATATACTTGTTCACAACAAGTGTGCTTCCCAAATCTCGAGGATATTTGTGTCAAAAAGTGCAACAAGTTGAAATACCTTTTTCATAATTTTGTGGCTGGTCACTTTCACAATCTGACCTTGTTGGAGATAGCAGACTGCTCTGAGTTACAGAAGGTTTTTGCTTTTGAATGTGAAACTGATGACGATGGTCAAGAAGGGATTGTTAAGGGTGGAGAAAATGTACTACTACATAACCTGCGAACTATAACACTCTGCAGTTTGCCAAACTTTAAAGAGATTCACCATGGATTCAAGTTAAAAGATGATGTTACGCGACATGACATAAATGATTGTCCTAAATATTCTCCAAGTTTATATCTATACTGA 3870 0.3736 MGEIVVSIIAKIAEYTVGPILHHARYLCCFNNFAGNLPNAKEDLELTRDSVKKRVREATNRTEKIEPAVEKWLKDVEKVLQEVQTLEGRILEVRKSIFRSQCQYFLAKEIARKIEKMTQLNRDSKFDPFSSKTELPGMKYHSFEDFVPFKSTESTYNEILEELSDKSFIMIGLHGMGGSGKTTLVKEVGKKVEELKLFEKVVMAVVSQTPNIRSIQEQIADKLGLKFEENSEEGRAQRLSKRLSEGKTLLILDDVWEKLNFEAIGIPFNENNKGCGVLLTTRSREVCTSMQCQSIIELHLLTDEEAWDLFQFYAKITDDSSAALKGVATKIVNQCKGLPIAIVTLGSTLRGKTLEEWELALLRLEDSKPLDIPKGLTSPHVCLRSSYDNLTNQLAKSLLLLCSIFPEDHEIDLEDLFRFGRGWGLIGTFGTLEKSRKEMHVAINILRDSCLLLHTKIKEKVKMHDLVRDVALWIASESDREILAGAAMDPTILVQGGNIKDKKAISLWNWRNGQLPDDQLNCPRLEILLLHSLYDGFEVSNACLERLKMLKILAFLGSGYEWIADYAERSKTLLLPQSFESLKNLHTLCLRGYKLGDISILESLQALEILDLRWSSFEELPNGIVALKNLKLLDLFCCKIEKDNAYEVIGECLQLEELYLYLLQSKKNFPQNAIFSRLRRYVIIQFTKESDRYFFFFQWSYFFRKQRPSRVLCIEGFNASVQSFISLPIKDFFQKAEYLELRHLKGGYKNVIPSMDPQGMNHLIFLILEYCPEIKCVFDGTTMQTEDAFSSLVILRLYELDNLEEVFHDPSSRCSLKSLEELTLESCRQLYNISFPKNSKLCHLKSLRIYNCPMLTCIFYPSIVQTLELLEEVRISECYELKQMIEEVEEGSVDYVSSQSHTSLMLPKLRTLTIHGCRSLKYIFPMCYAHGLASLEKLDIGFCDKLKYVFGSEKEHDLRVYQHQSHPQTNIHINLGALWLNDLPNLVEIWPKYFDPHLPNLKELRCYYCPRLPDSWVRRVMIIDSDLQQDSTATEKELLCSVTTTFNQLSDQVLSSKLTHLQLHGLGVKGLFQFQIREHGSNRELAPLNLDLIYAELSDLPELEFIWKGPTNFLSLHMLKWIFVLECPKLKTIFSPTIVRSLPMLRSLHIIDCEKLEQIFDSGDAQSLYTCSQQVCFPNLEDICVKKCNKLKYLFHNFVAGHFHNLTLLEIADCSELQKVFAFECETDDDGQEGIVKGGENVLLHNLRTITLCSLPNFKEIHHGFKLKDDVTRHDINDCPKYSPSLYLY* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1742 1289 Coils Coil 69 89 - -
Gso14g1742 1289 Pfam NB-ARC domain 154 368 IPR002182 GO:0043531
Gso14g1742 1289 Coils Coil 41 61 - -
Gso14g1742 1289 Gene3D - 300 386 IPR042197 -
Gso14g1742 1289 Gene3D - 134 297 IPR027417 -
Gso14g1742 1289 SUPERFAMILY RNI-like 1055 1260 - -
Gso14g1742 1289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 401 IPR027417 -
Gso14g1742 1289 PANTHER DISEASE RESISTANCE PROTEIN RP 8 1166 IPR044974 GO:0006952
Gso14g1742 1289 PANTHER DISEASE RESISTANCE PROTEIN-RELATED 8 1166 - -
Gso14g1742 1289 Gene3D Ribonuclease Inhibitor 488 835 IPR032675 -
Gso14g1742 1289 Gene3D Ribonuclease Inhibitor 836 953 IPR032675 -
Gso14g1742 1289 Gene3D Ribonuclease Inhibitor 1036 1223 IPR032675 -
Gso14g1742 1289 Gene3D - 387 472 IPR036388 -
Gso14g1742 1289 SUPERFAMILY L domain-like 460 978 - -
Gso14g1742 1289 PRINTS Disease resistance protein signature 170 185 - -
Gso14g1742 1289 PRINTS Disease resistance protein signature 242 256 - -
Gso14g1742 1289 PRINTS Disease resistance protein signature 335 349 - -
Gso14g1742 1289 PRINTS Disease resistance protein signature 814 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1742 Gso-Chr14 49700956 49707130 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1742 171 481 WRKY Transcription Factor Family AT5G45050 26.415 6.18e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1742 - - gmx:102664497 2541.15