Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1739 ATGAATGTTTCTAACTGGTTTTGCTGTTACCAGGGCAAGGAAAGTAAAACACTGTTCAGTTCAGGACAGAAAATTAAGAGGTTTGGTGAGCTCTGGGTTCCTGGGATGCATCTTTCAAAGGGTTGTAGGTGTGAAGTTGTTTTCTGTTTGTGGTTCTGCTGCTATTTCCTATTGGCTGCCGGTCAGGTCACTGACCCCACTGAAGTTGAGGCATTGAAAGTCATAAAGGGAAAATTGATTGATATTAATGGAAATTTGAGCAACTGGGATCGTGGAGACCCATGTACATCTGACTGGACAGGGGTTATGTGCTCCAATACAACAGTGGACAATGGTTATCTACATGTTCTACGATTGCAACTACTGAATTTGAACTTGTCTGGAAATTTGGCACCCGAAATCGGCAACTTATCTCATCTCCAAATATTGGATTTTATGTGGAATAAAATAAATGGGACTATACCGAAGGAGATTGGAAACATCAAAACTTTGAAACTCTTACTCCTGAATGGAAATGAACTAACAGGTGATCTGCCAGAAGAGCTTGGCCATCTTCCAGTCTTGGACAGAATACAAATTGATGAGAACCATATTACAGGATCCATACCATTATCATTTGCAAATCTGAACAGCACGAGACACTTTCACATGAACAACAATTCACTTAGTGGACAAATCCCACCACAGCTGTCCCAATTAGGGAGCCTGATGCACCTTCTTCTTGACAACAATAACTTAACAGGAAATCTCCCATCCGAGTTCTCTGAGATGCCAAGCTTAAAGATACTTCAACTTGATAACAATAACTTCAGTGGAAATAGCATTCCAGAATCTTATGGCAACATGCCAAAATTGTTGAAATTGAGCCTTAGGAACTGCAACTTGCAAGGACCAATTCCTGATTTCAGCAGGATATCACACCTTACTTATCTTGACCTGAGTTTCAATCAGTTGAATGAATCAATTCCTACCAATAAGCTGTCAGACAATATCACAACCATTGACTTATCAAACAACAAGCTCACCGGGACAATTCCATCCTACTTTTCTGGTCTTCCACGCCTTCAGAAATTGTCAATTGCAAAAAATTCATTGAGTGGCAATGTTCCTTCTACCATTTGGCAGAACAGGACTTTAAATGGAACAGAGCAAATTATCCTGGACATGCAAAATAATCAATTTGCAAGCATATCTGGCACTACAAATCTTCCTGCAAATGTTACACTGTTGCTTGAGGGAAATCCTGTATGCTTAAATAATAACTCCTTAGTTCAGTTCTGTGGACCTGAAGGTGACAATAACAAGAATGGAGGCTCCATTGTTGTCTGTCCCAGTCAAGGATGCCCCCCGCCTTATGAATACAATGTGGACTGTTTCTGTGCTGCCCCATTGGTTGTTCATTACCGGTTGAAAAGTCCAGGATTTTCAGATTTCCATGCATACGTGAGAGAATTTGAGAGCTTCCTCACAAATGGTCTTACTATACATACTAATCAGCTGTTCATTGAGCATTTTGCATGGGAAGAAGGGCGGTTGAGAATGAACTTGAAGGTTTTTCCTGAATATATTGGCAATGGAAGTTTTCACATGTTCAGCACAAGTGAGGTTAGTCGGATCGGAGACTTGTTCAGACAATGGGACATTCCTGACAATGAACTTTTCGGGCCTTATGAACTTCTGGACTTTATTCTACTGGATCTTTACAGGGATGTGATTATCCCCTCTTCAAGTTCAGGAATAAGCAAAGGTGCACTGGTTGGAATAATCTTAGGAGCAATTGTTTGTGCAGTTACATTATCTGCAATTGTTTCCATTCTTATTTTGAGAGTACGCTTGAGAGATTATCGAGCACTTTCCAGAAGGCGTAATGAATCTAGGATCATGATAAAAGTTGATGGTGTAAGATCATTTGATTACAAAGAAATGGCCTTGGCTACAAACAATTTTAGCGAGTCTGCTCAAATTGGAGAAGGGGGCTATGGGAAGGTTTATAAAGGTCATCTTCCTGATGGCACTGTTGTTGCCATAAAACGTGCACAGGACGGTTCACTGCAAGGTGAGAGGGAGTTCCTTACAGAAATAGAATTGCTGTCTAGGCTACACCATCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATGTTGGTTTATGAATATATGCCAAATGGAACACTAAGAGATCACCTTTCTGCTTATTCAAAAGAACCCCTTAGTTTTTCTCTGAGGTTGAAGATTGCTCTAGGATCAGCCAAAGGTCTTTTATATCTACACACAGAAGCTAATCCTCCAATATTCCACCGAGATGTGAAGGCCAGCAATATATTATTGGACTCTAGGTACACAGCAAAAGTTGCTGATTTTGGACTTTCACGACTTGCCCCAGTTCCAGATACTGAAGGAAATGTACCTGGTCATGTATCAACAGTGGTAAAGGGGACCCCGGGTTATCTTGATCCAGAGTACTTCTTGACTCGCAATTTGACTGACAAAAGTGATGTTTATAGTCTTGGTGTTGTACTTCTGGAACTTCTGACTGGGAGGCCACCAATCTTTCATGGTGAAAATATTATTAGACAGGTTAATATGGCATACAATTCTGGTGGAATATCTTTGGTTGTTGATAAACGTATTGAGTCTTATCCTACTGAGTGCGCGGAGAAATTTTTGGCTTTAGCCTTAAAGTGTTGCAAAGATACCCCAGATGAGAGGCCTAAAATGTCAGAAGTGGCTAGAGAGCTTGAATACATCTGTTCTATGTTACCTGAGTCAGATACGAAAGGACATGATTATGTCATTACAAGTGACTCTTCTGGTACAATATTCAGTTCAGAACCTTCATCTTCTGTTATAAAAACTCCTTTTATTTCAGGAGATGTTTCAGGTAGTGACCTTGTTAGTGGAAGTATACCAACCATCAAGCCAAGATAG 2943 0.405 MNVSNWFCCYQGKESKTLFSSGQKIKRFGELWVPGMHLSKGCRCEVVFCLWFCCYFLLAAGQVTDPTEVEALKVIKGKLIDINGNLSNWDRGDPCTSDWTGVMCSNTTVDNGYLHVLRLQLLNLNLSGNLAPEIGNLSHLQILDFMWNKINGTIPKEIGNIKTLKLLLLNGNELTGDLPEELGHLPVLDRIQIDENHITGSIPLSFANLNSTRHFHMNNNSLSGQIPPQLSQLGSLMHLLLDNNNLTGNLPSEFSEMPSLKILQLDNNNFSGNSIPESYGNMPKLLKLSLRNCNLQGPIPDFSRISHLTYLDLSFNQLNESIPTNKLSDNITTIDLSNNKLTGTIPSYFSGLPRLQKLSIAKNSLSGNVPSTIWQNRTLNGTEQIILDMQNNQFASISGTTNLPANVTLLLEGNPVCLNNNSLVQFCGPEGDNNKNGGSIVVCPSQGCPPPYEYNVDCFCAAPLVVHYRLKSPGFSDFHAYVREFESFLTNGLTIHTNQLFIEHFAWEEGRLRMNLKVFPEYIGNGSFHMFSTSEVSRIGDLFRQWDIPDNELFGPYELLDFILLDLYRDVIIPSSSSGISKGALVGIILGAIVCAVTLSAIVSILILRVRLRDYRALSRRRNESRIMIKVDGVRSFDYKEMALATNNFSESAQIGEGGYGKVYKGHLPDGTVVAIKRAQDGSLQGEREFLTEIELLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSAYSKEPLSFSLRLKIALGSAKGLLYLHTEANPPIFHRDVKASNILLDSRYTAKVADFGLSRLAPVPDTEGNVPGHVSTVVKGTPGYLDPEYFLTRNLTDKSDVYSLGVVLLELLTGRPPIFHGENIIRQVNMAYNSGGISLVVDKRIESYPTECAEKFLALALKCCKDTPDERPKMSEVARELEYICSMLPESDTKGHDYVITSDSSGTIFSSEPSSSVIKTPFISGDVSGSDLVSGSIPTIKPR* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1739 980 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524
Gso14g1739 980 Pfam Protein kinase domain 650 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1739 980 Gene3D Ribonuclease Inhibitor 326 417 IPR032675 -
Gso14g1739 980 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 46 951 - -
Gso14g1739 980 CDD STKc_IRAK 655 919 - -
Gso14g1739 980 Pfam Leucine rich repeat 330 375 IPR001611 GO:0005515
Gso14g1739 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Gso14g1739 980 SUPERFAMILY L domain-like 75 424 - -
Gso14g1739 980 Gene3D Ribonuclease Inhibitor 220 325 IPR032675 -
Gso14g1739 980 Pfam Leucine rich repeat N-terminal domain 66 105 IPR013210 -
Gso14g1739 980 ProSiteProfiles Protein kinase domain profile. 649 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1739 980 ProSiteProfiles Leucine-rich repeat profile. 120 141 IPR001611 GO:0005515
Gso14g1739 980 Gene3D Phosphorylase Kinase; domain 1 619 724 - -
Gso14g1739 980 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 46 951 - -
Gso14g1739 980 Gene3D Ribonuclease Inhibitor 66 219 IPR032675 -
Gso14g1739 980 Gene3D Transferase(Phosphotransferase) domain 1 725 939 - -
Gso14g1739 980 SMART serkin_6 649 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1739 980 SUPERFAMILY Protein kinase-like (PK-like) 634 948 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1739 Gso-Chr14 49644102 49655883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1739 53 931 Receptor kinase-like Gene Family AT5G01950 55.543 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gso14g1739 Pkinase 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1739 - - gmx:100801035 1497.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0450 18 4426649 4438174 Gso14g1739 14 49644102 49655883 PCT