Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1737 ATGACAGAGGTTACTTTGAATTCAAGTGTCAATATCTTATACCATACAGCCAAAAAAATCTCCATGAAGTTCTACTCCTTGCAAGCGCATCGTTTCCTTTTCATCATTGTTATTCTTTGTCCCCTGGTCATTGCTGACTTAAGTTCTGACAAGCAAGCTCTTCTTGATTTTGCTGCTGCTGTCCCTCATCGCCGTAACCTTAAGTGGAACCCAGCTACCCCAATCTGTTCATCTTGGGTAGGCATCACTTGCAATCTAAATGACACTCGTGTTGTTTCTGTGCGGCTCCCGGGAATTGGACTAGTTGGCACCATCCCTGCCAATACACTTGGCAAGATTGACTCACTCAGAAATATCAGCCTCCGCGCCAACTTACTCAGTGGAAGTCTTCCTGCTGATATTACCTCTCTTCCTTCTCTACAGTATCTCTACCTTCAGCATAATAACCTTTCTGGCAACATACCTACCTCATTGTCGACCCGCCTCAATGTACTTGATTTGTCATACAATTCCTTCACTGGTGCTATTCCAAAGACATTACAAAACTTAACACAACTAATCAAGTTGAACCTCCAGAACAACTCCCTATCTGGACTGATACCAAATCTCAATGTAACGAAGCTCAGGCGCTTGAATTTAAGCTACAACCATTTGAATGGTTCTATCCCTGCTGCTCTTCAAATTTTTCCAAATTCTTCCTTTGAGGGTAACTCTCTATGTGGGTTACCTCTAAAGTCATGCCCCGTAGTCCCCTCTACACCTCCTCCATCGTCTACTCCTGCCCCACCATCAACTCCTGCAAGACATAGCTCCAAAAGTAAACTGAGTAAGGCAGCTATCATTGCAATTGCGGTTGGTGGGGGTGTGCTATTGCTTTTAGTAGCTCTCATCATTGTTCTTTGCTGTTTCAAGAAAAAAGATGATGGAAGCCCCAGAGCAACTAAAGGCAAGGGTCCTAGTGGTGGGAGAAGTGAGAAGCCGAAAGAAGAGTTTGGAAGTGGGGTGCAAGAACCTGAGAAAAACAAGTTGGTTTTCTTTGAGGGAAGTTCTTATAATTTTGACCTTGAGGATTTGCTGAGAGCTTCAGCTGAAGTTCTTGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAGGAGTCGACAACAGTTGTAGTGAAAAGGTTGAAAGAAGCCGTGGTAGGCAAAAGGGAATTTGAACAGCAGATGGAGATTGTGGGAAGGGTTGGACATCACCCAAATGTTGTGCCCCTTCGTGCTTATTATTATTCTAAGGACGAGAAGCTCTTGGTTTATGACTACATCCCAAGTGGCAATCTATCTACCCTCTTGCATGGTAACAGGGCAAGTGGTAGAACTCCATTAGATTGGAACTCCAGAATAAAAATCTCTGTAGGAATTGCCAGAGGAATTGCTCACATACATTCTGTTGGAGGTCCAAAATTTGCGCACGGAAATGTTAAATCCTCGAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCTGACTTTGGCCTGACCCCGCTTATGAATGTTCCTTCCACCCCTTCTAGAGCTGCAGGATATCGTGCTCCTGAAGTGATTGAAACGCGTAAGCACACTCACAAGTCAGACGTGTACAGTTTTGGTGTCCTCCTTCTGGAAATGCTGACTGGGAAAGCACCACAACAATCTCCGGGGCGTGATGATATGGTTGATCTCCCTAGGTGGGTCCAATCTGTTGTTAGGGAGGAGTGGACGGCTGAGGTTTTTGATGTGGAGCTAATGAGATACCAAAACATTGAAGAGGAAATGGTGCAAATGTTGCAAATTGCCATGGCCTGTGTGGCAAAGGTTCCAGATATGAGGCCTAGCATGGAGGAAGTAGTGAGAATGATTGAAGAGATCCGGCTATCCGACTCGGAAAACCGGCCATCTTCGGAAGAGAATAGATCCAAGGAGGAATCAACTGCTCAAACTCCATAA 1971 0.447 MTEVTLNSSVNILYHTAKKISMKFYSLQAHRFLFIIVILCPLVIADLSSDKQALLDFAAAVPHRRNLKWNPATPICSSWVGITCNLNDTRVVSVRLPGIGLVGTIPANTLGKIDSLRNISLRANLLSGSLPADITSLPSLQYLYLQHNNLSGNIPTSLSTRLNVLDLSYNSFTGAIPKTLQNLTQLIKLNLQNNSLSGLIPNLNVTKLRRLNLSYNHLNGSIPAALQIFPNSSFEGNSLCGLPLKSCPVVPSTPPPSSTPAPPSTPARHSSKSKLSKAAIIAIAVGGGVLLLLVALIIVLCCFKKKDDGSPRATKGKGPSGGRSEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEAVVGKREFEQQMEIVGRVGHHPNVVPLRAYYYSKDEKLLVYDYIPSGNLSTLLHGNRASGRTPLDWNSRIKISVGIARGIAHIHSVGGPKFAHGNVKSSNVLLNQDNDGCISDFGLTPLMNVPSTPSRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPQQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKVPDMRPSMEEVVRMIEEIRLSDSENRPSSEENRSKEESTAQTP* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1737 656 Gene3D Ribonuclease Inhibitor 162 248 IPR032675 -
Gso14g1737 656 SUPERFAMILY Protein kinase-like (PK-like) 364 638 IPR011009 -
Gso14g1737 656 Gene3D Transferase(Phosphotransferase) domain 1 436 654 - -
Gso14g1737 656 CDD STKc_IRAK 366 631 - -
Gso14g1737 656 Pfam Leucine rich repeat N-terminal domain 48 85 IPR013210 -
Gso14g1737 656 SUPERFAMILY L domain-like 60 231 - -
Gso14g1737 656 ProSitePatterns Protein kinases ATP-binding region signature. 366 397 IPR017441 GO:0005524
Gso14g1737 656 PANTHER OS05G0588300 PROTEIN 15 656 - -
Gso14g1737 656 PANTHER LRR RECEPTOR-LIKE KINASE 15 656 - -
Gso14g1737 656 MobiDBLite consensus disorder prediction 631 656 - -
Gso14g1737 656 MobiDBLite consensus disorder prediction 251 270 - -
Gso14g1737 656 ProSiteProfiles Protein kinase domain profile. 360 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1737 656 Pfam Protein kinase domain 363 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1737 656 MobiDBLite consensus disorder prediction 308 336 - -
Gso14g1737 656 Gene3D Ribonuclease Inhibitor 49 161 IPR032675 -
Gso14g1737 656 Pfam Leucine rich repeat 161 218 IPR001611 GO:0005515
Gso14g1737 656 Gene3D Phosphorylase Kinase; domain 1 328 435 - -
Gso14g1737 656 MobiDBLite consensus disorder prediction 631 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1737 Gso-Chr14 49603555 49609225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1737 21 654 Receptor kinase-like Gene Family AT5G58300 68.643 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso14g1737 Pkinase 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1737 - - gmx:100776232 1197.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1737 14 49603555 49609225 Gso2g2016 2 44661826 44667726 GST
Gso18g0453 18 4484570 4489301 Gso14g1737 14 49603555 49609225 PCT
Gso14g1737 14 49603555 49609225 Gso18g0453 18 4484570 4489301 PCT