Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1728 ATGGGGGATATCGTTGTTTCCATCGTAGCAAAGTTAGCAGAATATACAGTGGACCCAATTTTACACCATGCTCGATACTTGTGTTGTTTCAACAACATTGCTGGGAATCTTCCAAATGCCAAGGAAGAATTGGAATTAACCCGAAACAGTGTGAAGGAACGAGTTGAAGAAGCTATTATGAGGACTGAAAAAATTGAACCAGCAGTTGAGAAGTGGCTGAAAGATGTTGAGAAAGTCTTAGAAGAAGTGCATATGCTTCAAGGAAGAATTTCGGAAGTAAACAAGAGCCATTTCAGAAGGCAATTCCAATATTTTCTTACAAAAAAAATAGCAAGAAAAATTGAGAAAATGGCTCAACTCAACCACAACAGCAAGTTTGATCCATTTTCTAAGATTGCCGAACTTCCAGGAATGAAGTACTATTCATCCAAAGATTTTGTTCTTTTCAAATCAAGAGAATCGACTTATGAGAACCTTTTGGAAGCTTTAAAGGATAAAAGTGTTTCCATGATTGGACTAGTTGGACTAGGAGGCTCAGGAAAAACTACTTTGGCGAAAGAGGTTGGTAAGAAAGCTGAGGAGTTAAAACTTTTTGAGAAGGTAGTCATGGTAACAGTCTCTCAAACTCCAAATATTAGAAGCATCCAAGTGCAAATTGCTGATAAGTTGGGTTTGAAATTTGTGGAAGAATCAGAGGAAGGTAGAGCACAAAGACTATCAAAGAGATTAAGGACAGGCACAACTCTACTAATCTTGGATGATGTATGGGAAAACCTAGACTTTGAAGCTATAGGTATTCCATACAATGAAAATAATAAGGGGTGTGGAGTACTCTTAACCACTCGGAGTAGAGAAGTATGCATTTCCATGCAATGCCAAACAATAATTGAGCTCAATCTCTTAACTGGTGAGGAAGCTTGGGATTTGTTCAAATTGAATGCAAACATAACTGGTGAGTCCCCATATGTATTGAAAGGCGTTGCAACAAAAATTGTTGATGAATGTAAAGGATTGCCTATTGCAATTGTGACGGTGGGAAGCACACTAAAGGGCAAAACTTTTGAAGAGTGGGAGTCCGCACTGTCAAGACTAGAAGATTCCAAACCACTGGATATTCCAAAAGGCTTAAGAAGTCCTTATGCTTGTCTGCAATTAAGTTATGATAATTTGACTAATCAACTAGCCAAGTCCTTGTTCTTGTTGTGCTCTATATTTCCAGAGGATCATGAAATTGATTTGGAAGATTTGTTTCGATTTGGAATGGGCCTAACTGGGACTTTTGGAACAATGGTGAAAGGAAGGAGGGAGATGCAGACAGCTGTTAGCGTCCTCATTGATTCTTATTTGTTGTTGCAGGTCAGTAAAAAAGAAAGAGTGAAAATGCATGACATGGTTCGTGATGTAGCCTTGTGGATAGCCTCTAAAACTGGTCAAGCAATTTTGGCAAGTACTGGAAGGGATCAGTTAATGGATGAAACCATAAAAGATAAGAGGGCAATATCCTTATGGGATTTGAAAAATGGCCAGCTTCTTGGTGATGATCAATTGAATTGTCCATCGCTTGAAATTCTCTTGTTTCATTCTCGCAAGGTTGCCTTTGAAGTATCAAATGCTTGTTTTGAAAGGCTAAAAATGATTAAAATCCTGGCATTCTTAACATCTAGCTATACGTGGAGTTTATATACGACATCTCGCACCTTGTCACTGCCACAATCAATGAAGTCATTACAAAATCTTCATACTCTGTGCTTGAGAGGTTATAAATTAGGTGACATCTCCATTTTGGAAAGCCTACAAGCACTTGAGGTTCTTGACTTGCGTGGTTCTTCTTTTATAGAATTGCCTAATGGAATCGCGTCATTAAAGAAATTGAAGCTTCTGGATTTGTTCTGTTGTTTCATTCAGGAAAATAATGCTTACGAGGTTATAGGAAGATGTATGCAGCTGAATGAATTGTATTTGTATATACGTTCATATGCATATGTGGAATTTCCGCATAATATCTCTTTCTCAAGATTAGAGAGGTATGTTTTAATTTATAATATGGACCCCTTATACTCGTTGTCGTGGATGGAAATATTGGAAGAACATAGACCATGTAGAGCGTTATGCACACGTGGTTTTAATGCGTCAGTTCAAAGTTTTATATCATTACCAATCAAGGATTTCTTTCAAAAAGCAGAGTACCTTCATTTGGAGCACCTTAAGGGAGGTTACGAAAATGTAATCCCATCCATAGTTCCACAAGGCATGAATCACTTGATTTTCCTTAAGTTAGAATCTTGTCCAGAGATAGAATGCGTCTTTGATAGTACCAATGTTGATCTGCTGCAAACTGAAGATGCGTTCTCCAGCCTAGTCATTTTAATCTTGTCTGAATTGGATAACCTTCAAGAAGTGTTTGATGACCCCTCTTCCAGATGTTCTCTCAAAAGTTTAGAAGAGCTAACCATATGGAGTTGCAGACAATTGTACAATATTTCTTTTCCCAAGAACTCAAAGCTATGCCATCTTAAGGTCTTGACAATAAGAGATTGCCCGATGCTAACTTGTATCTTCAAGCCATCCATTGTCCAAACTCTAGAGCTGCTAGAAGAAGTGACAATATCTGACTGCTATGAATTGAAGCAGATAATAGAAGAAGTGGAAGAAGGGAGTGTTGATTATGTTAGCAGTCAAAGTCATACCTCTTTGATGCTCCCAAAATTAAGGACACTTACTATTCTTCGATGTCACAGCTTGGAATATATATTCCCTATGTGTTATGTTCACGGGCTAGCAAGTTTGGAAGAGCTGCACATTAAATTTTGTGATAAGTTGAAGTATGTATTTGGCAGTGAAAAGGAACATGATCTTAGAGTGTACCAGCACCAGAGTCATCCTCAGACTAATATTCACATCAATTTCCTTAATTTGAAAACTCTACGGTTGAATCAGTTGCCGAATTTGGTTGAGATTTGGCCTAAATATTTTGATCCACATTTACCAAATTTGAAAGTGCTAGGATGCATTGATTGTCCAAGACTGCCTGACTCTTGGGTGCGTAGGGTGATGATTATTGATTCAGATCTGCAACAAGACTCAACTGCAACGGAGAAGGAATTACTATGTTTGGTTACCATCACATTCAACCAATTATCCGATCAAGTGCTTTCCTCTAAACTTAGACATGTACTCAAATTTAGAGAACTTCAATTGTCTGGTCTTGGAGTAAAAGGTCTTTTCCAATTCCAAATCAGAGAACATGGGAGCAACAGAGAACTTGCTCCTTTAAACTTGGATCTAACTCATGCTGATTTGAGGGATCTACCTGAGCTCGAGTTCATATGGAAGGGCCCCACAAATTTTCTAAGCCTCCAGATGCTTGACACGATTCAGGTGAATGGATGTCCAAAATTGAAAACCATCTTCTCCCCTACCATTGTTAGAAGCTTACCAATGCTGGGAAGACTGGAAATAACTGATTGTGAGGAATTGGAGCAAATATTTGATTCAGGTGATGCACAAAGCCTATATACTTGTTCACAACAAGTGTGCTTCCCAAATCTCAGTATTATTTGGGTCGAAAAGTGCAACAAGTTGAAATACCTTTTTCATAATTTTGTGGCTGGTCACTTCCACAATCTGATCGAGTTGGAGATAGAAGACTGCTCTGAGTTACAGAAGGTTTTTGCTTTTGAATGTGAAACTGATGACGATGGTCAAGAAGGGATTGTTAAGGATGGAGAAAAAGTACTACTACGTAACCTGCTACGTATAAGACTCAGCCGTTTGCCAAACTTCAAAGAGATTCACCATGGATTCAAGTTAAAATTTGATGTTATGCTACATGACATAACTGATTGTCCTAAATATTCTCCAAGTTTATATCTACACACAGTACAGAAGAGTAAAGAATGA 3900 0.3815 MGDIVVSIVAKLAEYTVDPILHHARYLCCFNNIAGNLPNAKEELELTRNSVKERVEEAIMRTEKIEPAVEKWLKDVEKVLEEVHMLQGRISEVNKSHFRRQFQYFLTKKIARKIEKMAQLNHNSKFDPFSKIAELPGMKYYSSKDFVLFKSRESTYENLLEALKDKSVSMIGLVGLGGSGKTTLAKEVGKKAEELKLFEKVVMVTVSQTPNIRSIQVQIADKLGLKFVEESEEGRAQRLSKRLRTGTTLLILDDVWENLDFEAIGIPYNENNKGCGVLLTTRSREVCISMQCQTIIELNLLTGEEAWDLFKLNANITGESPYVLKGVATKIVDECKGLPIAIVTVGSTLKGKTFEEWESALSRLEDSKPLDIPKGLRSPYACLQLSYDNLTNQLAKSLFLLCSIFPEDHEIDLEDLFRFGMGLTGTFGTMVKGRREMQTAVSVLIDSYLLLQVSKKERVKMHDMVRDVALWIASKTGQAILASTGRDQLMDETIKDKRAISLWDLKNGQLLGDDQLNCPSLEILLFHSRKVAFEVSNACFERLKMIKILAFLTSSYTWSLYTTSRTLSLPQSMKSLQNLHTLCLRGYKLGDISILESLQALEVLDLRGSSFIELPNGIASLKKLKLLDLFCCFIQENNAYEVIGRCMQLNELYLYIRSYAYVEFPHNISFSRLERYVLIYNMDPLYSLSWMEILEEHRPCRALCTRGFNASVQSFISLPIKDFFQKAEYLHLEHLKGGYENVIPSIVPQGMNHLIFLKLESCPEIECVFDSTNVDLLQTEDAFSSLVILILSELDNLQEVFDDPSSRCSLKSLEELTIWSCRQLYNISFPKNSKLCHLKVLTIRDCPMLTCIFKPSIVQTLELLEEVTISDCYELKQIIEEVEEGSVDYVSSQSHTSLMLPKLRTLTILRCHSLEYIFPMCYVHGLASLEELHIKFCDKLKYVFGSEKEHDLRVYQHQSHPQTNIHINFLNLKTLRLNQLPNLVEIWPKYFDPHLPNLKVLGCIDCPRLPDSWVRRVMIIDSDLQQDSTATEKELLCLVTITFNQLSDQVLSSKLRHVLKFRELQLSGLGVKGLFQFQIREHGSNRELAPLNLDLTHADLRDLPELEFIWKGPTNFLSLQMLDTIQVNGCPKLKTIFSPTIVRSLPMLGRLEITDCEELEQIFDSGDAQSLYTCSQQVCFPNLSIIWVEKCNKLKYLFHNFVAGHFHNLIELEIEDCSELQKVFAFECETDDDGQEGIVKDGEKVLLRNLLRIRLSRLPNFKEIHHGFKLKFDVMLHDITDCPKYSPSLYLHTVQKSKE* 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1728 1299 Coils Coil 41 61 - -
Gso14g1728 1299 Pfam NB-ARC domain 153 389 IPR002182 GO:0043531
Gso14g1728 1299 Gene3D Ribonuclease Inhibitor 511 696 IPR032675 -
Gso14g1728 1299 SUPERFAMILY RNI-like 1043 1263 - -
Gso14g1728 1299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 402 IPR027417 -
Gso14g1728 1299 Gene3D - 301 386 IPR042197 -
Gso14g1728 1299 Gene3D - 387 470 IPR036388 -
Gso14g1728 1299 Gene3D - 141 297 IPR027417 -
Gso14g1728 1299 PRINTS Disease resistance protein signature 170 185 - -
Gso14g1728 1299 PRINTS Disease resistance protein signature 242 256 - -
Gso14g1728 1299 PRINTS Disease resistance protein signature 335 349 - -
Gso14g1728 1299 PRINTS Disease resistance protein signature 596 612 - -
Gso14g1728 1299 PANTHER DISEASE RESISTANCE PROTEIN-RELATED 7 1170 - -
Gso14g1728 1299 Gene3D Ribonuclease Inhibitor 968 1230 IPR032675 -
Gso14g1728 1299 Gene3D Ribonuclease Inhibitor 706 951 IPR032675 -
Gso14g1728 1299 PANTHER DISEASE RESISTANCE PROTEIN RP 7 1170 IPR044974 GO:0006952
Gso14g1728 1299 SMART AAA_5 167 300 IPR003593 -
Gso14g1728 1299 SUPERFAMILY L domain-like 455 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1728 Gso-Chr14 49468344 49503944 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1728 168 632 WRKY Transcription Factor Family AT5G45050 23.962 4.17e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1728 - - gmx:112999375 2352.78