Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1725 ATGGGGGATATCGTTGTTTCCATCGTAGCAAAGTTAGCAGAATATACAGTGGGCCCAATTTTACACCATGCTCAATACTTGTGTTGTTTCAACAACATTGCTGGGAATCTTCCAAATGCCAAGGAAGAATTGGAATTAACCCGAAACAGTGTGAAGGAACGAGTTGAAGAAGCTATTATGAGGACGGAAATAATTGAACCAGCAGTTGAGAAGTGGCTGAAAGATGTTGAGAAAGTCTTAGAAGAAGTGCATATGCTTCAAGAAAGAATTTCGGAAGTAAGCAAGAGCTATTTCAGAAGGCAATTCCAATATTTTCTTACAAAAAAAATAGCAAGAAAAATTGAGAAAATGGCTCAACTCAACCACAACAGCAAGTTTGATCCATTTTCTAAGATTGCCGAACTTCCAGGAATGAAGTACTATTCATCCAAAGATTTTGTTCTTTTCAAATCAAGAGAATCGACTTATGAGAACCTTTTGGAAGCTTTAAAGGATAAAAGTGTTTCCATGATTGGACTAGTTGGACTAGGAGGCTCAGGAAAAACTACTTTGGCGAAAGAAGTTGGTAAGAAAGCTGAGGAGTTAAAACTTTTTGAGAAGGTTGTCATGGCAACAGTCTCTCAAACTCCAAATATTAGAAGCATCCAATTGCAAATTGTTGATAACTTGGGTTTGAAATTTGTGGAAGAATCAGAGGAAGGCAGAGCACAAAGACTATCAGAGAGATTAAGGACAGGCACAACTCTACTAATCTTGGATGATGTATGGGAAAACCTAGACTTTGAAGCTATAGGTATTCCATACAATGAAAATAATAAGGGGTGTGGAGTACTCTTAACCACTCGGAGTAGAGAAGTATGCATTTCCATGCAATGCCAAACAATAATTGAGCTCAATCTCTTAACTGGTGAGGAAGCTTGGGATTTGTTCAAATTGAATGCAAACATAACTGGTGAGTCCCCATATGTATTGAAAGGCGTTGCAACAAAAATTGTTGATGAATGTAAAGGATTGCCTATTGCAATTGTGACGGTGGGAAGCACATTAAAGGGCAAAACTTTTGAAGAGTGGGAGTCCGCACTGTCAAGACTAGAAGATTCCAAACCACTGGATATTCCAAAAGGCTTAAGAAGTCCTTATGCTTGTCTGCAATTAAGTTATGATAATTTGACTAATCAACTAGCCAAGTCCTTGTTCTTGTTGTGCTCTATATTTCCAGAGGATCATGAAATTGATTTGGAAGATTTATTTCGATTTGGAAAGGGAATGGGCCTAACTGGGACTTTTGGAACAATGGTGAAAGCAAGGAGGGAGATGCAGACAGCTGTTAGCATCCTCATTGATTCTTTTTTGTTGTTGCAGGCCAGTAAAAAAGAAAGAGTGAAAATGCATGACATGGTTCGTGATGTAGCCTTGTGGATAGCATCTGAAAGGGGTCAAGCAATTTTGGCAAGTACTGGAATGGATCCAAGAATGTTGATAGAGGATGAAACCATAAAAGATAAGAGGGCAATATCCTTATGGGATTTGAAAAATGGCCAGCTTCTTGATGATGATCAATTGAATTGTCCATCACTTGAAATTCTCTTGTTTCATTCTCCCAAGGTTGCCTTTGAAGTATCAAATGCTTGTTTTGAAAGGCTAAAAATGATTAAAATCCTGGCATTCTTGACATCTAGCTATAAGTGGGGATCCTGGTGGACAAAAATTCCATCATATCGCAACTTGTCACTGCCACAGTCAATCGAGTCATTAAAATATCTTCATACTCTATGCTTGAGAGGCTATCAATTAGGTGACATCTCCATTTTGGAAAGCCTAAAAGCACTTGAGATTCTTGACTTGCGTGGTTCTTCTTTCATAGAATTGCCTAATGGAATCGCGTCATTAAAGAAATTGAAGCTTCTGGATTTGTTCCATTGTTTCCTTCAGACAAAAAATGCTTACGAGGTTATAGGAAGATGTTTGCAGCTGAATGAATTGTATTTGTATATAAATTCATATGCATATGAGGAATCTCCGCATAATATCTCTTTCTCAAGATTAGAGAGGTATGTTTTAATTTATAAAATGTACCCCTGGCACCTGCCGACTGACATGTTGGAAGAACATAGACCAACTAGAGCTTTATGCATAGATGGTTTTAATGCCTCAGTTCAAAGTTTTATATCATTACCAATTAAGGATTTCTTTCAAAAAGCAGAGTACCTTGAATTGAGGTACCTTAAGGGAGGTTACAAAAATGTAATCCCATCCATGGATCCACAAGGCATGAATCACTTGATTTTCCTAAAGTTAGAATATTGTCCAGAGATAGAATGCCTCTTTGATAGTACCAATGTTGATCTGCTGCAAACTGAAGATGCGTTCTCCAGCCTAGTCATTTTAAGGTTGTCTCAATTGGATAACCTTGAAGAAGTGTTTCATGACCCCTCTTCCAGATGCTCTCTCAAAAGTTTAGAAATTCTAAACATAGACTATTGCAGACAATTGTACAATATTTCCTTTCCCAAGAACTCAAAGCTATGCCATCTCAAGGTCTTGAGAATATATAATTGCCCGATGCTAACTTGTATCTTCAAGCCATCCATTGTCCAAACTCTAGAGCAGCTAGAAGAAGTGAGAATATCTGAATGCTATGAATTGAAGCACATAATAGAAGAAGTGGAAGAAGGGAGTGTTGATTATGTTAGCAGCCAAAGTCATACCTCTTTGATGCTCCCAAAATTAAGGACACTTACTATTCGTCGATGTCAGGGGTTGGAATATATATTCCCTATGTGTTGTGCTCATGGGCTAGCAAGTTTGGAAGAACTGGACATTGAAGAATGTAATGAGTTGAAGTATGTATTTGGCAATGAAAAGGAACATGATCTTAGAGTGTACCAGCACCAGAGTCACCGTCAAACTAAAGTTGACATCAATTTGCTCTATTTGGGTGAGCTCCATTTAAAGTCATTACCGAATCTGGTTGAAATTTGGCCTAAATATTGTCATCCACGTTTACCAAATTTGGAAAAGTTAATCTGCCAAAATTGTCCAAGATTGTCAAATTTTTTTCTGCATATGGCGGTGATTGATTCAAATCTGCAGCCAGACACAACTCCAATGAAGAAATGGAATGGAGTGGAGAATGCAGCTCTGATTAGACAATGGTATTACGTACTGTCAAAAGTGCTTGAAGTTGTCGCCCAACTGATTTACATACGTAGGAAGAGGTTATCAGGACTTCTTGATCCAGAAAACAACTTCAATTTGTCTTTCGTTTCATGCTCTTGA 3279 0.3797 MGDIVVSIVAKLAEYTVGPILHHAQYLCCFNNIAGNLPNAKEELELTRNSVKERVEEAIMRTEIIEPAVEKWLKDVEKVLEEVHMLQERISEVSKSYFRRQFQYFLTKKIARKIEKMAQLNHNSKFDPFSKIAELPGMKYYSSKDFVLFKSRESTYENLLEALKDKSVSMIGLVGLGGSGKTTLAKEVGKKAEELKLFEKVVMATVSQTPNIRSIQLQIVDNLGLKFVEESEEGRAQRLSERLRTGTTLLILDDVWENLDFEAIGIPYNENNKGCGVLLTTRSREVCISMQCQTIIELNLLTGEEAWDLFKLNANITGESPYVLKGVATKIVDECKGLPIAIVTVGSTLKGKTFEEWESALSRLEDSKPLDIPKGLRSPYACLQLSYDNLTNQLAKSLFLLCSIFPEDHEIDLEDLFRFGKGMGLTGTFGTMVKARREMQTAVSILIDSFLLLQASKKERVKMHDMVRDVALWIASERGQAILASTGMDPRMLIEDETIKDKRAISLWDLKNGQLLDDDQLNCPSLEILLFHSPKVAFEVSNACFERLKMIKILAFLTSSYKWGSWWTKIPSYRNLSLPQSIESLKYLHTLCLRGYQLGDISILESLKALEILDLRGSSFIELPNGIASLKKLKLLDLFHCFLQTKNAYEVIGRCLQLNELYLYINSYAYEESPHNISFSRLERYVLIYKMYPWHLPTDMLEEHRPTRALCIDGFNASVQSFISLPIKDFFQKAEYLELRYLKGGYKNVIPSMDPQGMNHLIFLKLEYCPEIECLFDSTNVDLLQTEDAFSSLVILRLSQLDNLEEVFHDPSSRCSLKSLEILNIDYCRQLYNISFPKNSKLCHLKVLRIYNCPMLTCIFKPSIVQTLEQLEEVRISECYELKHIIEEVEEGSVDYVSSQSHTSLMLPKLRTLTIRRCQGLEYIFPMCCAHGLASLEELDIEECNELKYVFGNEKEHDLRVYQHQSHRQTKVDINLLYLGELHLKSLPNLVEIWPKYCHPRLPNLEKLICQNCPRLSNFFLHMAVIDSNLQPDTTPMKKWNGVENAALIRQWYYVLSKVLEVVAQLIYIRRKRLSGLLDPENNFNLSFVSCS* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1725 1092 Pfam NB-ARC domain 153 389 IPR002182 GO:0043531
Gso14g1725 1092 Coils Coil 41 61 - -
Gso14g1725 1092 PANTHER DISEASE RESISTANCE PROTEIN-RELATED 7 1021 - -
Gso14g1725 1092 SUPERFAMILY L domain-like 462 1017 - -
Gso14g1725 1092 Gene3D - 387 472 IPR036388 -
Gso14g1725 1092 Gene3D - 301 386 IPR042197 -
Gso14g1725 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 402 IPR027417 -
Gso14g1725 1092 PRINTS Disease resistance protein signature 170 185 - -
Gso14g1725 1092 PRINTS Disease resistance protein signature 242 256 - -
Gso14g1725 1092 PRINTS Disease resistance protein signature 335 349 - -
Gso14g1725 1092 PRINTS Disease resistance protein signature 931 947 - -
Gso14g1725 1092 Gene3D Ribonuclease Inhibitor 899 1031 IPR032675 -
Gso14g1725 1092 Gene3D Ribonuclease Inhibitor 712 898 IPR032675 -
Gso14g1725 1092 PANTHER DISEASE RESISTANCE PROTEIN RP 7 1021 IPR044974 GO:0006952
Gso14g1725 1092 SMART AAA_5 167 300 IPR003593 -
Gso14g1725 1092 Coils Coil 69 96 - -
Gso14g1725 1092 Gene3D Ribonuclease Inhibitor 567 671 IPR032675 -
Gso14g1725 1092 Gene3D - 141 297 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1725 Gso-Chr14 49437117 49448334 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1725 168 641 WRKY Transcription Factor Family AT5G45050 22.388 6.43e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1725 - - gmx:102662074 2061.57