Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1724 ATGGAGGTTGAGGTTTGCATGAACGTTTCGTGCAAGAATGGCTATGCGAGAGAATGGAAGAAGGGGTGGCCTCTGCGATCGGGTGGATTCGCTAGACTCTGCCACAAGTGCGGATCTGCCTATGAAAATTTAATTTTCTGTCAGAAATTTCACCTATATCAAACAGGGTGGAGAGAGTGTTCCTTTTGCAATAAGACTGTCCACTGTGGATGTATAGTATCAAGCTCTATGTTTGAGTACCTTGATTATGGAGGAATAGGTTGTGCTACCTGTGTGAAGACTTCACAACTTAATTTGATACGGGATACTAAAAACACTATTGGGTCTGTTAGATCAATAAAAAACAATGCACGCAATCGTCATACTGAACATATCGATGGTAGATTATTGGTGGACAGTGCTGGCAAAGGAAACCTTATGCTGTTGCGTAGAGATGTTGAAGCTAGTGAATCCATCCGTTGGCCTCGAGCAGAGAGAGATGGCATAGATTCATGTATTGGTCCAAACAGGCAAGAGGATAGAAGATTTTCAAATGTGGTGAAACTGTCTGGTCATTCATTAAATTTTACAACATTGGATCATAACAGACCAACATGGGAGACACAAACTATGCACAAATCAAGTTCACTGAATATGTCTCTTGGAACCTCATCAGGAAATTCTGTCCAGCCTTCTGCTTTGGACATTGCAGAAAGGAGACTTGAGGATAAAGCATCCTTTTGTCCCTTTCCTCAAGGGCAAAGATCTCTCTCCATATCTAAATCATTGATGGATGGGATAACCATGAATCTGGAAGATAGCAAAGATGTGATTTCTCAGGAACGCGTTGCCCGGCTACCTGCTAATGGGAAACCCAAGAATCTGTTACATTTTCGATACTGGCCTAGGATTACAGGTCAAGAGCTGGAGAAATTGTCGGGAGATTTGAAGTCTACTATAGTGCCATTGTTTGAGAAGGTATTGAGTGCCAGTGATGCAGGTCGAATTGGTCGACTTGTTCTCCCAAAATCTTGTGCTGAGGCTTACTTTCCTCCTATTTCACAGTCAGAAGGTCTTCCTTTGCAGTTCAAAGATGTGAAGGGAAATGACTGGACATTTCAGTTCAGATTTTGGCCTAATAACAATAGTAGGATGTATGTATTGGAGGGAGTAACCCCTTGCATACAGGCCATGCAATTAAATGCTGGTGATATTGTAACATTTAGTCGGATAGATCCTGGAGGCAAATTTGTCATGGGTTACAGAAGGGCATCAGATTCTATGGATACACAAGTTGATGCCTCTACTTTTGCTCACTCCAATGGTTTTGCAACAAAGGAAGCAACCTTTTCTGGTGCAACTGCAAATCTGCACTCAGGAAAAAGTTATCCTGATCTTCTCCAGACAAGGAATGGAAATGGCGAACCTTACTTAAATGGATGTTCAGAACATTTGCGTTTTGGTACTGGAACTGCTGATTGTCTACAAACTGAAAATTGTGAGATGGTAAACAATGATTTGCTGCAGCAAACAATTTCAGTTTCTGAGAAGACTCTAAATATTGCACCAAAGAGTAAGAGGTTGCTGACACATAATGAAGATGCTGTGGAGTTGAGAATTACATGGGAAGAAGCACAAGACTTGCTTCATCCACCACCTAGTACCATGCCAAGTGTTGAAACAATTGAGGACAAAGAATTTGAGGAATTTGAGGAACCCCCGGTTTTTGGAAAGGGGACTACAATCAATGACCCCCCATCTGGGTCTTTGAGCTCTGCATCAGAGAAAATGAGTTCAATGGACTTAGAAAATATTCCAGTAACCAGCAAAGATTCTAAAAAGCGAAGAATTATGGAAAAACTTGATTCATCAGCTGGTGCCACAACCAAGCATCCAAGGCACTGTTCTGGATGCACTTGCATTCTGTGCATTCAGCCCCCAAGTGGAAAAGGAAGACATAAGCCAACATGCACGACCGTGAGGCGCCAATTCAAGACCCTTATGAAGCGTAAGAAGCAACGCGAATCAGATGCTACTCAAAATGATCAGATTCATCACAGTGATGAGGGAGATACCCATGGTGCATCAAGAGAGGGTGCAATTGCAAGTAACTTGGAGAATGAGGGAAGCCTCAACAGAATGGATGAACTCGGTACAGGACAAATAGACCTTAATAGTCATCCGGATCATGAATAA 2175 0.4225 MEVEVCMNVSCKNGYAREWKKGWPLRSGGFARLCHKCGSAYENLIFCQKFHLYQTGWRECSFCNKTVHCGCIVSSSMFEYLDYGGIGCATCVKTSQLNLIRDTKNTIGSVRSIKNNARNRHTEHIDGRLLVDSAGKGNLMLLRRDVEASESIRWPRAERDGIDSCIGPNRQEDRRFSNVVKLSGHSLNFTTLDHNRPTWETQTMHKSSSLNMSLGTSSGNSVQPSALDIAERRLEDKASFCPFPQGQRSLSISKSLMDGITMNLEDSKDVISQERVARLPANGKPKNLLHFRYWPRITGQELEKLSGDLKSTIVPLFEKVLSASDAGRIGRLVLPKSCAEAYFPPISQSEGLPLQFKDVKGNDWTFQFRFWPNNNSRMYVLEGVTPCIQAMQLNAGDIVTFSRIDPGGKFVMGYRRASDSMDTQVDASTFAHSNGFATKEATFSGATANLHSGKSYPDLLQTRNGNGEPYLNGCSEHLRFGTGTADCLQTENCEMVNNDLLQQTISVSEKTLNIAPKSKRLLTHNEDAVELRITWEEAQDLLHPPPSTMPSVETIEDKEFEEFEEPPVFGKGTTINDPPSGSLSSASEKMSSMDLENIPVTSKDSKKRRIMEKLDSSAGATTKHPRHCSGCTCILCIQPPSGKGRHKPTCTTVRRQFKTLMKRKKQRESDATQNDQIHHSDEGDTHGASREGAIASNLENEGSLNRMDELGTGQIDLNSHPDHE* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1724 724 SUPERFAMILY DNA-binding pseudobarrel domain 314 416 IPR015300 -
Gso14g1724 724 SMART B3_2 317 417 IPR003340 GO:0003677
Gso14g1724 724 Gene3D - 295 422 IPR015300 -
Gso14g1724 724 ProSiteProfiles B3 DNA-binding domain profile. 317 418 IPR003340 GO:0003677
Gso14g1724 724 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 3 582 - -
Gso14g1724 724 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 584 724 - -
Gso14g1724 724 MobiDBLite consensus disorder prediction 575 592 - -
Gso14g1724 724 CDD B3_DNA 315 416 IPR003340 GO:0003677
Gso14g1724 724 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 582 - -
Gso14g1724 724 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 584 724 - -
Gso14g1724 724 MobiDBLite consensus disorder prediction 663 688 - -
Gso14g1724 724 Pfam B3 DNA binding domain 317 417 IPR003340 GO:0003677
Gso14g1724 724 MobiDBLite consensus disorder prediction 567 592 - -
Gso14g1724 724 MobiDBLite consensus disorder prediction 660 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1724 Gso-Chr14 49426646 49434468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1724 1 721 B3 DNA Binding Superfamily AT2G30470 40.075 1.07e-164 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gso14g1724 B3 1.7e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1724 - - gmx:100799429 1448.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1724 14 49426646 49434468 Gso2g2009 2 44553219 44561293 GST
Gso18g0462 18 4566897 4576245 Gso14g1724 14 49426646 49434468 PCT
Gso14g1724 14 49426646 49434468 Gso18g0462 18 4566897 4576245 PCT