Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1722 ATGCAAGATCCATCTTCAAACCCTAATTCCAATCCAAATCCCAATCCTCACAATGCCAATGCCGCATCCCAGCTACCGCGTCCACCGCCGGCCACCACCGCCGGCGCCGGCGCCTCCTCGTCCTCGCTGTTCGCGCGCTCCGGCGGGCCTCACCACCGGCGAGCCCATTCGGAAGTGAGTTTCCGGCTGCCGGACGACATGATGGACCTCTCGCAGTCGGATCCGTTCGCCGGCGGGTCGTCGACGGCCAGCATGGAGGAGATCGGATCGGAGGACGACCTGTTCTCGACGTACATTGACGTGGACAAGCTCGGCGGCGCAAACGGGTCGGGCGCCGCCGGAAACGGAGCGGATCCGACCGGCGAAACCGAGAAGAGTCCGGCGAGGCCGCGACACCGGCACAGTAGCTCCGTCGATTTCGGGGAAATTATGGATGCGAAGAAAGCTATGCCTCCTGATAAGTTAGCTGAGCTATGGACAATTGATCCCAAGCGTGCTAAGAGAATACTTGCAAATCGGCAATCTGCTGCTCGATCGAAGGAGAGAAAAGCGCGCTACATACAAGAACTTGAGCGCAAGGTTCAGACTCTTCAGACGGAAGCCACAACTCTTTCTGCCCAATTGACCTTATACCAGAGGGACACAACAGGACTGAGTACTGAAAATACAGAGCTAAAGCTCCGTTTGCAAGCCATGGAGCAACAAGCACAACTTCGTGACGCTCTTAATGAAGCATTGAAGAAGGAAGTTGAGAGGCTTAAGGTTGCTACTGGTGAGATGATGAGCCACACTGATTCCTTTAATCTGGGAATGCACCTGATGCCATTTTCCGGATCAAATTTCGTTCCAATCCCGCCACAATCAGGTCCTTCTGGTCACCAAAACATGCAGATGCCACCATTTGGTCTCACCCCATCCACAATGCCAAGCCATCTACTGCATCAAACAAGTTCTCATCCATATTCAGAAATATTGCAAAATGACCAGCTTGGTCGTTTCCAGGGGCTTGACATTAGTAGCAAAGGATCAACTCTCGTGAAGTCTGAAGGCCCCTCACTCTCCGCAAGTGAGAGTAGCACTACATTTTGA 1089 0.5363 MQDPSSNPNSNPNPNPHNANAASQLPRPPPATTAGAGASSSSLFARSGGPHHRRAHSEVSFRLPDDMMDLSQSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGGANGSGAAGNGADPTGETEKSPARPRHRHSSSVDFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSHTDSFNLGMHLMPFSGSNFVPIPPQSGPSGHQNMQMPPFGLTPSTMPSHLLHQTSSHPYSEILQNDQLGRFQGLDISSKGSTLVKSEGPSLSASESSTTF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1722 362 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 359 - -
Gso14g1722 362 Coils Coil 228 259 - -
Gso14g1722 362 MobiDBLite consensus disorder prediction 281 314 - -
Gso14g1722 362 SUPERFAMILY Leucine zipper domain 164 215 IPR046347 GO:0003700|GO:0006355
Gso14g1722 362 CDD bZIP_plant_RF2 165 214 IPR044759 GO:0003700|GO:0006355
Gso14g1722 362 Pfam bZIP transcription factor 164 219 IPR004827 GO:0003700|GO:0006355
Gso14g1722 362 MobiDBLite consensus disorder prediction 109 136 - -
Gso14g1722 362 SMART brlzneu 160 224 IPR004827 GO:0003700|GO:0006355
Gso14g1722 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 162 225 IPR004827 GO:0003700|GO:0006355
Gso14g1722 362 MobiDBLite consensus disorder prediction 342 362 - -
Gso14g1722 362 Gene3D - 163 215 - -
Gso14g1722 362 Coils Coil 180 207 - -
Gso14g1722 362 PANTHER ATBZIP TRANSCRIPTION FACTOR 6 359 - -
Gso14g1722 362 MobiDBLite consensus disorder prediction 1 27 - -
Gso14g1722 362 MobiDBLite consensus disorder prediction 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1722 Gso-Chr14 49372764 49375891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1722 1 362 bZIP Transcription Factor Family AT2G40620 52.130 3.64e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso14g1722 bZIP_1 5.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1722 - - gmx:778172 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1722 14 49372764 49375891 Gso2g2007 2 44528458 44531400 GST
Gso18g0465 18 4609535 4612865 Gso14g1722 14 49372764 49375891 PCT
Gso14g1722 14 49372764 49375891 Gso18g0465 18 4609535 4612865 PCT