Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1719 ATGGGTAACAACAAGTTCAAGTTGTCAGATATGATACCAAATGCTTGGTTTTACAAGCTGAAAGATATGAGCAGATCAAGGAAGAGAAATGGTTCTCATGTTATGAAGAGTAAAGTGTCTTCACCAACAACATCACAAAGGTCTCTGCCAAGATATTCACAGTATTTTTCCACTGAGCCAATAAGAGCTGGTAAGCTATACAACACTCCCATTCACACCAAAGACTTGGACTTGCCATTCACTGATTCACCTAGAAGGTCTTCCAAGAGAAGGGCTAGGAGAAAAACCATCTACAAGCCTTCTCCCACTGTCGTTCCCTCTTCCGGCTATGACTCCCCAAATCATTGGATCAAGCCATGTCAAGTTCAGTCACCAGATTATGATGTGTCTTCAGCTGAAAGCTCTTCTGAGTCTGATCTTCATGAATATGCTTATTCTGAGTCTGAATGTGACAGCTTTTCTGTTCCTGACTTGTTTAATGGAGTAGACACTAATTGCAGCTGCAGAGTTAGCTCTTCCACTAATGACATCATCATTGACATGAACAGTGAGTCCTTCATTGGGAATCCTGAAAAGCAAGATGGGTTTAATGCAATTTCACAGCTTGGTCTTGCTCCAATATTGACAAGGCCAATGAAGTTTGATGATAAGGTCATCGAAGCAGCTGAGTTGAGGAGTTCAACGGATTTGGATGAGCTGCAGGATGATCAGTCTTTCTCAATTGAGATTCTCAAAGAGGAATGCAATAGAATTCAAAGGAGGAGAAAAAGCAGTCATAGAAAGCCCTTTGCTAATTCTGCAGGCATAAGGCTTAGGGTCCATTCTCCAAAACTTGCAAGCAGAAAAATTCAAGCATGTGCAAGGAGTGTGTCACCCATTTCAAGAAAAGCTCCAAGGAGTACAGGCTTCCTAGATGGATTTGCTGTTGTTAAGTCCTCATTTGATCCACAGAGTGACTTCAGGGAGTCAATGCTGGAGATGATTGTGGAGAACAATATCCGCGCATCAAAGGATTTGGAGGACTTGCTTGCCTGCTACCTTTCCCTCAATTCAAGTGAATATCGTGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTTGACATGACTCAACTAAGAATGTAA 1125 0.416 MGNNKFKLSDMIPNAWFYKLKDMSRSRKRNGSHVMKSKVSSPTTSQRSLPRYSQYFSTEPIRAGKLYNTPIHTKDLDLPFTDSPRRSSKRRARRKTIYKPSPTVVPSSGYDSPNHWIKPCQVQSPDYDVSSAESSSESDLHEYAYSESECDSFSVPDLFNGVDTNCSCRVSSSTNDIIIDMNSESFIGNPEKQDGFNAISQLGLAPILTRPMKFDDKVIEAAELRSSTDLDELQDDQSFSIEILKEECNRIQRRRKSSHRKPFANSAGIRLRVHSPKLASRKIQACARSVSPISRKAPRSTGFLDGFAVVKSSFDPQSDFRESMLEMIVENNIRASKDLEDLLACYLSLNSSEYRDLIVKAFEQIWFDMTQLRM* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1719 374 MobiDBLite consensus disorder prediction 35 53 - -
Gso14g1719 374 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Gso14g1719 374 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 373 - -
Gso14g1719 374 ProSiteProfiles OVATE domain profile. 309 368 IPR006458 -
Gso14g1719 374 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 373 IPR038933 GO:0045892
Gso14g1719 374 Coils Coil 241 261 - -
Gso14g1719 374 MobiDBLite consensus disorder prediction 27 53 - -
Gso14g1719 374 MobiDBLite consensus disorder prediction 77 110 - -
Gso14g1719 374 Pfam Transcriptional repressor, ovate 313 369 IPR006458 -
Gso14g1719 374 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 307 370 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1719 Gso-Chr14 49312142 49313498 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso14g1719 Ovate 2.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1719 - - gmx:100797854 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1719 14 49312142 49313498 Gso2g2003 2 44460724 44462280 GST
Gso18g0477 18 4789745 4791279 Gso14g1719 14 49312142 49313498 PCT
Gso14g1719 14 49312142 49313498 Gso18g0477 18 4789745 4791279 PCT