Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1709 ATGTTTGGACATCCAGAGACAGATAGATTAGATGAGATAATTACAACGGCGAGAGCAGAGGAAGAAGCATCTTCTCAAATGGGAAGGAAGCATTTCTATGGTCCAACTCCTGGGACAACCTTAAACACAGTAACTCCTTGTGCTGCATGCAAGCTTTTGAGAAGAAGGTGTGCTGAAGAATGCCCTTTCTCTCCTTATTTTTCACCACATGAGCCTCAAAAGTTTGCAGCAGTTCACAAGGTGTTTGGTGCAAGCAATGTCTCCAAGATGCTAATGGAGGTACCAGAGGGCCAAAGAGCTGATGCAGCAAATAGCCTTGTTTATGAAGCTAACTTGAGGCTAAGAGATCCTGTATATGGATGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAAACTTTACAAGCAGAACTAAATGCAATAAGGGCAGAGATACTAAAATACAAATATAGAGAGGCTGCAAGTATAATTTCTTCTCAACATGTTGCTTTGGTTTCTTCTGCTGATGCAATATCAATAGCAGCAATTCCTGCAGACTCATCACAAGGTCTTTCTCAACCTCATGCTCATCCTCATCCTCCTCCTCCAAAACCATTGCCTTCTCCTCTACCAAAACCATTGCCTTCTCCTTCTATTATCCTTTCATCCTTGTCTTCATCTTCAGCTTCTTCTGTGTACACTCCTCCTAAAAGCACAATGAGCCTTGGATCCATTTCCACCACTGCAAATGTCCCATACTTTGTTTAG 750 0.424 MFGHPETDRLDEIITTARAEEEASSQMGRKHFYGPTPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQTLQAELNAIRAEILKYKYREAASIISSQHVALVSSADAISIAAIPADSSQGLSQPHAHPHPPPPKPLPSPLPKPLPSPSIILSSLSSSSASSVYTPPKSTMSLGSISTTANVPYFV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1709 249 Pfam Lateral organ boundaries (LOB) domain 46 142 IPR004883 -
Gso14g1709 249 Coils Coil 125 152 - -
Gso14g1709 249 MobiDBLite consensus disorder prediction 189 210 - -
Gso14g1709 249 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 27 248 - -
Gso14g1709 249 MobiDBLite consensus disorder prediction 182 215 - -
Gso14g1709 249 PANTHER LOB DOMAIN PROTEIN 27 248 - -
Gso14g1709 249 ProSiteProfiles LOB domain profile. 45 146 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1709 Gso-Chr14 49218422 49221262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1709 27 162 AS2 family AT2G30340 78.832 5.90e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso14g1709 LOB 9.2e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1709 14 49218422 49221262 Gso2g1993 2 44341666 44343133 GST