Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1702 ATGAGGCTGGATGGCTTGTGGGTACCTTGTACCTTCACTTTATATAAGTCCTTTCTTTTGTTAGCAATGTTTTGTAACACCCAAACATATAACAAGATGGCTTCTTTTCATATCCAATATTCATTCCTTGTGCTTGTGCTTGCTATGGTGATCACATTGATGAACCCTACCAATGCAACCCTCTCTCCCCATTTCTATGATAAAGTTTGCCCTCAGGCATTGCCAGTCATAAAGTCAGTGGTTCAACGAGCAATTATCCGTGAGCGACGCATAGGAGCATCTCTTCTGCGCTTGCATTTCCATGATTGTTTCGTAAATGGGTGTGATGGATCAATATTGCTAGATGACACCCGAAACTTCACTGGCGAGAAGACTGCATTGCCAAATCTTAATTCAGTCAGAGGTTTTTCTGTGGTTGATGAAATCAAAGCTGCGGTGGACAAAGCCTGCAAACGCCATGTGGTCTCATGTGCAGATATCTTGGCCATTGCAGCCCGTGATTCTATAGCCATATATGGGGGTCCACACTACTGGTACCAAGTATTGTTGGGCAGAAGAGATGCAAGAACTGCAAGCAAAGCTGCTGCAAACTCCAATCTTCCTCCTCCAACATTCAGCTTCTCACAGCTTGTTTCCAACTTCAAATCTCACGGCTTAAACGTGAGGGACCTTGTGGCCCTCTCTGGAGGCCACACCATAGGGTTTGCAAGGTGCACCACCTTCAGAAACAGAATCTACAACGTAAGCAACAACATAATAGACCCCACGTTTGCAGCATCTGTGAGGAAGACATGTCCGAAAAGCGGAGGAGACAACAACTTGCATCCACTTGATGCTACACCCACAAGAGTTGACACCACATACTACACGGATTTGCTGCACAAAAAGGGTCTTCTCCATTCTGATCAAGAGCTGTTCAAGGGAAAAGGCACAGAAAGTGACAAATTGGTGCAACTATATAGTAGAATCCCTTTGGCTTTTGCTAGAGATTTTAAAGCTTCAATGATCAAGATGGGGAACATGAAGCCTCTCACTGGGAGGCAGGGAGAAATCAGATGCAATTGCAGAAGGGTCAACTAG 1080 0.4491 MRLDGLWVPCTFTLYKSFLLLAMFCNTQTYNKMASFHIQYSFLVLVLAMVITLMNPTNATLSPHFYDKVCPQALPVIKSVVQRAIIRERRIGASLLRLHFHDCFVNGCDGSILLDDTRNFTGEKTALPNLNSVRGFSVVDEIKAAVDKACKRHVVSCADILAIAARDSIAIYGGPHYWYQVLLGRRDARTASKAAANSNLPPPTFSFSQLVSNFKSHGLNVRDLVALSGGHTIGFARCTTFRNRIYNVSNNIIDPTFAASVRKTCPKSGGDNNLHPLDATPTRVDTTYYTDLLHKKGLLHSDQELFKGKGTESDKLVQLYSRIPLAFARDFKASMIKMGNMKPLTGRQGEIRCNCRRVN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1702 359 CDD secretory_peroxidase 61 358 IPR033905 GO:0004601|GO:0042744
Gso14g1702 359 SUPERFAMILY Heme-dependent peroxidases 61 359 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 Pfam Peroxidase 78 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Plant peroxidase signature 70 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Plant peroxidase signature 94 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Plant peroxidase signature 134 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Plant peroxidase signature 154 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Plant peroxidase signature 222 234 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Plant peroxidase signature 275 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Plant peroxidase signature 291 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Plant peroxidase signature 333 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 ProSitePatterns Peroxidases active site signature. 92 103 IPR019794 GO:0004601
Gso14g1702 359 ProSitePatterns Peroxidases proximal heme-ligand signature. 223 233 IPR019793 -
Gso14g1702 359 Gene3D - 65 359 - -
Gso14g1702 359 PANTHER CATIONIC PEROXIDASE 37 358 - -
Gso14g1702 359 PRINTS Haem peroxidase superfamily signature 92 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Haem peroxidase superfamily signature 155 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Haem peroxidase superfamily signature 175 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PRINTS Haem peroxidase superfamily signature 277 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 PANTHER PEROXIDASE 72-RELATED 37 358 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 ProSiteProfiles Plant heme peroxidase family profile. 60 359 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso14g1702 359 Gene3D Peroxidase, domain 2 201 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1702 Gso-Chr14 49172789 49176673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1702 59 359 Peroxidase AT5G05340 57.566 4.91e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1702 K00430 - gmx:100811170 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1702 14 49172789 49176673 Gso2g1988 2 44289060 44292462 GST
Gso18g0488 18 4909870 4913939 Gso14g1702 14 49172789 49176673 PCT
Gso14g1702 14 49172789 49176673 Gso18g0488 18 4909870 4913939 PCT