Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1688 ATGGCATCTTCTTCTGGTAGTTTAGACACCTCTGCAAGTGCAAACTCCTTCACCAACTTCACCTTCTCCACACACCCTTTCATGACCACTTCTTTCTCTGACCTCCTTGCTTCTCCCTTGGACAACAACAAGCCACCACAGGGTGGTTTGTCTGAGAGAACTGGCTCTGGTGTTCCCAAATTCAAGTCCACACCACCACCTTCTCTGCCTCTCTCTCCCCCTCCCATTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTGAGCCCTGCTGAGCTTCTTGACTCGCCGGTTCTCCTTAACTCTTCCAACATTCTGCCATCTCCAACAACTGGAGCATTTGTTGCTCAGAGCTTCAATTGGAAGAGCAGTTCAGGGGGGAATCAGCAAATTGTCAAGGAAGAAGACAAAAGCTTCTCAAATTTCTCTTTCCAGACCCGATCAGGACCTCCTGCTTCATCCACAGCAACATACCAGTCTTCAAATGTCACAGTTCAAACACAACAGCCATGGAGTTTTCAGGAGGCCACGAAACAGGATAATTTTTCCTCAGGAAAGGGTATGATGAAAACTGAAAACTCTTCTTCCATGCAGAGTTTTTCCCCTGAGATTGCTAGTGTCCAAACTAACCATAGCAATGGGTTTCAATCCGATTATGGCAATTACCCCCCACAATCTCAGACTTTAAGTAGAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGCCAAAAACAAGTGAAGGGAAGTGAAAATCCAAGAAGTTATTACAAATGCACATACCCCAATTGCCCTACAAAGAAGAAGGTTGAGAGGTCTTTAGATGGACAAATTACTGAGATAGTTTATAAGGGTACTCATAACCATCCTAAGCCTCAAAATACTAGGAGAAACTCATCAAACTCCTCTTCTCTTGCAATCCCTCATTCAAATTCCATCAGAACTGAAATCCCAGATCAATCCTATGCCACACATGGAAGTGGACAAATGGATTCAGCTGCCACCCCAGAAAACTCATCAATATCAATTGGAGATGATGATTTTGAGCAGAGTTCCCAAAAGTGTAAATCAGGAGGGGATGAATATGATGAAGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGTGAAAATGAGGGTATGTCAGCCCCTGGAAGTAGAACAGTGAGAGAACCTAGAGTTGTAGTTCAGACAACCAGTGACATTGATATCCTTGATGATGGCTATAGGTGGAGAAAATACGGGCAGAAAGTAGTGAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGCACACACCCAGGATGTCCAGTGAGGAAGCACGTGGAAAGAGCCTCACATGACCTAAGGGCTGTGATCACAACTTATGAGGGAAAGCACAACCATGATGTTCCTGCAGCCCGTGGCAGTGGCAGCCATTCTGTTAACAGACCAATGCCAAACAATGCTTCAAACCACACCAACACTGCAGCCACTTCCGTAAGGCTCTTGCCAGTGATCCACCAAAGTGACAATTCCCTTCAGAACCAAAGATCACAAGCACCACCAGAAGGGCAATCACCCTTCACCCTAGAGATGCTACAAAGTCCAGGAAGTTTTGGATTCTCAGGGTTTGGGAATCCAATGCAATCTTACGTGAACCAGCAGCAACTATCTGACAATGTTTTCTCCTCCAGGACCAAGGAGGAGCCTAGAGATGACATGTTCCTTGAGTCTCTACTATGCTGA 1728 0.4508 MASSSGSLDTSASANSFTNFTFSTHPFMTTSFSDLLASPLDNNKPPQGGLSERTGSGVPKFKSTPPPSLPLSPPPISPSSYFAIPPGLSPAELLDSPVLLNSSNILPSPTTGAFVAQSFNWKSSSGGNQQIVKEEDKSFSNFSFQTRSGPPASSTATYQSSNVTVQTQQPWSFQEATKQDNFSSGKGMMKTENSSSMQSFSPEIASVQTNHSNGFQSDYGNYPPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQNTRRNSSNSSSLAIPHSNSIRTEIPDQSYATHGSGQMDSAATPENSSISIGDDDFEQSSQKCKSGGDEYDEDEPDAKRWKIEGENEGMSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNASNHTNTAATSVRLLPVIHQSDNSLQNQRSQAPPEGQSPFTLEMLQSPGSFGFSGFGNPMQSYVNQQQLSDNVFSSRTKEEPRDDMFLESLLC* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1688 575 MobiDBLite consensus disorder prediction 349 377 - -
Gso14g1688 575 SUPERFAMILY WRKY DNA-binding domain 232 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g1688 575 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 47 548 IPR044810 GO:0003700
Gso14g1688 575 MobiDBLite consensus disorder prediction 63 81 - -
Gso14g1688 575 MobiDBLite consensus disorder prediction 284 307 - -
Gso14g1688 575 Gene3D WRKY domain 221 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g1688 575 SUPERFAMILY WRKY DNA-binding domain 397 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g1688 575 ProSiteProfiles WRKY domain profile. 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1688 575 ProSiteProfiles WRKY domain profile. 400 465 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1688 575 MobiDBLite consensus disorder prediction 320 389 - -
Gso14g1688 575 MobiDBLite consensus disorder prediction 141 237 - -
Gso14g1688 575 MobiDBLite consensus disorder prediction 288 307 - -
Gso14g1688 575 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 47 548 - -
Gso14g1688 575 MobiDBLite consensus disorder prediction 35 50 - -
Gso14g1688 575 MobiDBLite consensus disorder prediction 141 233 - -
Gso14g1688 575 MobiDBLite consensus disorder prediction 320 348 - -
Gso14g1688 575 MobiDBLite consensus disorder prediction 35 82 - -
Gso14g1688 575 Gene3D WRKY domain 392 458 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g1688 575 Pfam WRKY DNA -binding domain 234 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1688 575 Pfam WRKY DNA -binding domain 406 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1688 575 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1688 575 SMART WRKY_cls 405 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1688 Gso-Chr14 48982931 48986328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1688 231 574 WRKY Transcription Factor Family AT2G38470 55.462 3.50e-111 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso14g1688 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1688 K13424 - gmx:100127393 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1688 14 48982931 48986328 Gso2g1975 2 44147417 44150846 GST
Gso18g0501 18 5037758 5041353 Gso14g1688 14 48982931 48986328 PCT
Gso14g1688 14 48982931 48986328 Gso18g0501 18 5037758 5041353 PCT