Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1684 ATGCCTTTCCGAAATTCCAATATGATAGTACAGAAAAAGCTATGGAGAATTGTTGGATTTTTGTCAAGTGTGATTGGACTAATCTGTTACGCGTTGAGTTCCTCTTTCAACCACCTATTTGGAGAGTGGAACTTCTTGAAGATCATCCTTTACGCAGTGATAAGTTTCTCTATCAGCAGCATCATGTTACTTTTGAAAAAATGGAAACTTTCCAAGAGTTTCATGCTAAAAGCTCATGTGGGTGTTCTGGTTTTGTTGATCACTTCTGTGTACTCTTTTGTATCCGACAAAGCTGTGAATGGAAAACCAGACATGTTAAGTTTGATTTCGTGTTTTGCCTTTGCTTTCATGTCTCTGTGTCTGTCAAAGGAGATTGACCTTGGGTTTGGAGCAGATCTCCTCAATTTCTTCCTTGGATGCCTAACTGTTCAACTAATGCACATCCATTTGATGCTCTCTATTGTTGCAGCCATATTTTGCTATTGTTTCATGTTTTTTCGTTCCAAGTTGGATTCTCAATCACAGATTGGAACTGTAGAAGTTGAAGACCATGTAAACATAGAAATTGATGCTGAAGATGGAAAAAGAGAGTTTGATGACAACAGAAGTAACTTCCAAGCTAATCATAGCCACCAACAAGTTCCGTTATTAAGAATGGTGGGTGATGGGTACAATTGGAGAAAATATGAAGATAAAGTAGTGAAAGGAAGTGCAAACCAGTTAAGTTACTACAAATGCACACAACCCACTTGCTATGTGAAGAAAAAAGTTGAGAGAACTATAGAGGGGGAAATTGTTGATATACACTACCAGGGTACTCATACACATTGCGAGCGTATGCATAATATGAAGAGGAACTCTTCATCTGAATATTTATATTCAGTGTTACCTTCAGAGCCTGTCGCCTTTCCAGATCAATCATTTGCCTCTCAGGGCAATGGAGAATTGGATTATCATGTGCAGCAACAGAGAACTCCTCAATATCCAAATGAAATATGA 999 0.3824 MPFRNSNMIVQKKLWRIVGFLSSVIGLICYALSSSFNHLFGEWNFLKIILYAVISFSISSIMLLLKKWKLSKSFMLKAHVGVLVLLITSVYSFVSDKAVNGKPDMLSLISCFAFAFMSLCLSKEIDLGFGADLLNFFLGCLTVQLMHIHLMLSIVAAIFCYCFMFFRSKLDSQSQIGTVEVEDHVNIEIDAEDGKREFDDNRSNFQANHSHQQVPLLRMVGDGYNWRKYEDKVVKGSANQLSYYKCTQPTCYVKKKVERTIEGEIVDIHYQGTHTHCERMHNMKRNSSSEYLYSVLPSEPVAFPDQSFASQGNGELDYHVQQQRTPQYPNEI* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1684 332 SUPERFAMILY WRKY DNA-binding domain 218 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g1684 332 Pfam WRKY DNA -binding domain 222 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1684 332 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 284 IPR044810 GO:0003700
Gso14g1684 332 Gene3D WRKY domain 205 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso14g1684 332 ProSiteProfiles WRKY domain profile. 215 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1684 332 SMART WRKY_cls 220 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso14g1684 332 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 3 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1684 Gso-Chr14 48939103 48940425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1684 222 312 WRKY Transcription Factor Family AT2G37260 49.451 1.76e-19 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso14g1684 WRKY 2.1e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1684 - - gmx:102667674 648.662