Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1681 ATGGCTGATAGTGTTGTTGCTTTTGTGTTAGATAACTTGTCTCGGCTGCTTGAAGATGAGCACAAGTTGCTTTCTGGCGTGGAGGACAAAATCAATTCTCTGTGCAATGAGCTCAAGTTTATAGACATCTTCCTCAAGAATTCTGAGGGCAAGCGCAGTCATGAGATGGTGAAAGAAGTGGTGAGCCAAATCAGAGATGTTGCCCACAAAGCTGAAGATGTGGTTGACACCTACGTTTCCAGCATTGCCAAACAAAAACAGAGAAGCAAACTGAGCAAGTTATTCCACCTCAAAGAACATGTCATGGTGCTTCACCAAGTCAACTCTGACATAGAGAAGATCAGGAGTCGGATCGATGAGATCTATAAGAACAGGGACAGATATGGCATTGGAGAAGGTGAATTCCGAAGCGAAGAAGCTGCTGCAGAAGCAGAATCACTCCTCAAAAGAAGGAGGGAGGTAGAGGAAGATGTAATTCAGGAACTCATGGAAAGTGAGTCACGTCTTAAAGTTGTTTCCATAATTGGAATGGGAGGGTTGGGTAAGACCACTCTTGCCCGTAAGATCTATAACAACAATCAAGTGCAGCTGTGGTTTCCTTGCCTTGCATGGGTTTCTGTGTCCAATGATTACAGACCCAAGGAATTTCTTCTCAGCCTTCTCAAATGTTCAATGTCATCCACATCTGAAGAATTAAGTGAGGTAGAACTGAAGAAGAAGATAGCAGAATGGTTGAAAGGGAAGAAGTATCTGGTAGTGCTTGATGACATCTGGGAAACCCAAGTATGGGATGAGGTTAAAGGAGCCTTTCCAGATGACCAAACAGGTAGTAGAATTCTCATAACAAGTCGCAACAAAGAGGTGGCACACTATGCTGGAACTGCGTCTCCCTACTACCTTCCCATCCTCAATGAAGATGAAAGCTGGGAACTCTTCACAAAGAAGATTTTTAGAGGGGAAGAATGCCTGTCTGATTTAGAGCCTCTGGGTAGATCCATTGTGAAAATTTGTGGGGGTTTACCACTTGCCATTGTTGTTTTAGCAGGACTCGTTGCCAAGAAGGAGAAGTCACAAAGAGAGTGGTCAAGAATCAAGGAAGTGAGTTGGCATCTTACAGAGGATAAGACTGGAGTGATGGATATACTGAAGCTTAGCTATAACAACTTGCCTGGAAGATTAAAGCCTTGCTTTCTGTATTTTGGAATCTATCCAGAAGACTATGAGATCAGTGCAAGGCAATTGATCAAATATTGGATCGCAGAAGGGTTCATACAACCACAAAAAACTGGAATTGCAGATACAACAACAGAGCTGGAAGATGTAGCTGACTTTTACTTGGATGAGCTGGTGGATCGCAGCTTAGTGCAAGTGGCAAAAAGGAGGAGTGAAGGGGGTGTCAAGACATGTCGGATTCATGATCTTCTACGTGATCTTTGCATGTCAGAAAGCAAGTCTGATAAGTTTCTGGAGGTTTGCACAAACTCCAACATTGATACCGTCAGTAATACCAATCCCCGTAGAATGTCCATCCACTTGAAACGAGACTCGGATGTCGCTGCAAACACATTTAACAAATCATGCACTCGTTCTATGTTCATCTTTGGTAGTGATAGAGCGGACCTAGTTCCTGTTTTGAAAAACTTCAAGTTGGCCCGTGTGCTTGATTGTGATATGTTTCATGGGTTTTCGTCTTATTCAGTCCCCAGAGATTTGAAGAGGATGATCCATCTAAGATACTTGAGAATAAAAGTGAAGCACCTTCCAGATTGTGTATGCAGCCTTTGGAATCTAGAAACACTGCATGTAAGATATCGTGGGACAGTATCCAGTAAAATTTGGACGTTGAAGCGACTGAGACATCTTTATTTGAGTGGGGATGGGAAGTTACCAGTCCTCATGCCAAAAGCAAATAGAATGGAGAATCTCCAAACCCTTTTGTTATCAGGTAAGCATCCACAACAAATTATTTCCCTGTTGAACAGTGGCATATTTCCTAGGTTGCGAAAATTAGCTTTGCGCCTTCCTAATGAATCATGTATGTTATCAAGTCTAGAGCGCCTCAGCAATCTTCATAGCCTAAAAGTAATTCGCGGTTTTGAACTTCCATCAGACACCAATGCGTATCCATCAAATCTTACCAAGATAACCTTGGATCTAGCTGCATTCCTTGATCCCCAACCTTTCTTGAAGACACTAGGACGACTTCCCAACCTTCAAATCTTGAAACTAACTCCAAACGTCCGTTATATTCTTCTTGATATTGGCAGGGGAGAGTTCCCGCAACTTCAATTGCTTCATATGAGACAAATATATGTAAAACAATGGAAATTAGAGAAACATGCAATGCCTCGACTTCGACATCTGGTCATTGATAAATGTTATAGATTGTCTGAGCTTCCAGAAGAACTTTGGTCATTGACTGCCTTACGACTGGTGCATGTTTTGTGGCCCCCCAAAGAATTGGCTAACAGTCTAAAAGATTTGGAGCCCAGGAATGGCTGTAAGCTCATAGTCTCTAATGCTTCACAAACGTTGGAGCTAAGTGGGTCTGTACAATATTTACATTTCCATTTTCTTTGTCCAAATAAATTTCCAATTTGA 2601 0.4218 MADSVVAFVLDNLSRLLEDEHKLLSGVEDKINSLCNELKFIDIFLKNSEGKRSHEMVKEVVSQIRDVAHKAEDVVDTYVSSIAKQKQRSKLSKLFHLKEHVMVLHQVNSDIEKIRSRIDEIYKNRDRYGIGEGEFRSEEAAAEAESLLKRRREVEEDVIQELMESESRLKVVSIIGMGGLGKTTLARKIYNNNQVQLWFPCLAWVSVSNDYRPKEFLLSLLKCSMSSTSEELSEVELKKKIAEWLKGKKYLVVLDDIWETQVWDEVKGAFPDDQTGSRILITSRNKEVAHYAGTASPYYLPILNEDESWELFTKKIFRGEECLSDLEPLGRSIVKICGGLPLAIVVLAGLVAKKEKSQREWSRIKEVSWHLTEDKTGVMDILKLSYNNLPGRLKPCFLYFGIYPEDYEISARQLIKYWIAEGFIQPQKTGIADTTTELEDVADFYLDELVDRSLVQVAKRRSEGGVKTCRIHDLLRDLCMSESKSDKFLEVCTNSNIDTVSNTNPRRMSIHLKRDSDVAANTFNKSCTRSMFIFGSDRADLVPVLKNFKLARVLDCDMFHGFSSYSVPRDLKRMIHLRYLRIKVKHLPDCVCSLWNLETLHVRYRGTVSSKIWTLKRLRHLYLSGDGKLPVLMPKANRMENLQTLLLSGKHPQQIISLLNSGIFPRLRKLALRLPNESCMLSSLERLSNLHSLKVIRGFELPSDTNAYPSNLTKITLDLAAFLDPQPFLKTLGRLPNLQILKLTPNVRYILLDIGRGEFPQLQLLHMRQIYVKQWKLEKHAMPRLRHLVIDKCYRLSELPEELWSLTALRLVHVLWPPKELANSLKDLEPRNGCKLIVSNASQTLELSGSVQYLHFHFLCPNKFPI* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1681 866 Pfam Rx N-terminal domain 5 92 IPR041118 -
Gso14g1681 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 400 IPR027417 -
Gso14g1681 866 Gene3D - 5 119 - -
Gso14g1681 866 Gene3D - 302 390 IPR042197 -
Gso14g1681 866 SUPERFAMILY L domain-like 462 816 - -
Gso14g1681 866 CDD RX-CC_like 2 121 IPR038005 -
Gso14g1681 866 Gene3D - 392 481 IPR036388 -
Gso14g1681 866 Gene3D Ribonuclease Inhibitor 514 858 IPR032675 -
Gso14g1681 866 PRINTS Disease resistance protein signature 171 186 - -
Gso14g1681 866 PRINTS Disease resistance protein signature 244 258 - -
Gso14g1681 866 PRINTS Disease resistance protein signature 337 351 - -
Gso14g1681 866 PRINTS Disease resistance protein signature 613 629 - -
Gso14g1681 866 PANTHER - 37 839 - -
Gso14g1681 866 Pfam NB-ARC domain 156 388 IPR002182 GO:0043531
Gso14g1681 866 PANTHER DISEASE RESISTANCE PROTEIN RP 37 839 IPR044974 GO:0006952
Gso14g1681 866 Gene3D - 134 296 IPR027417 -
Gso14g1681 866 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1681 Gso-Chr14 48903949 48906716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1681 169 478 WRKY Transcription Factor Family AT5G45050 25.000 1.46e-11 66.6