Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1676 ATGGCGACGGATGCAAGGGCGAAGTTCCAAAACCCGGAATTCCGGCCCGATTTCCACGCGGACTTAACGGTGTCAACTCACGACGGCCTCCACTTCTGGCAGTTCATGATCGCCGGATCCATCGCGGGCTGCGTCGAGCACATGGCCATGTTCCCCGTTGACACCGTCAAGACCCGCATGCAAGCCATAGGCTCCTGCCCCGTCAAATCCGTAACGGTCCGTCACGCCCTCAAGTCCATTCTCCAATCGGAGGGCCCGTCGGCCCTCTACCGTGGCATCGGTGCTATGGGCCTCGGCGCCGGGCCCGCCCACGCCGTCTACTTCTCCGTCTACGAGACCTGCAAGAAGAAATTCTCCGAGGGCAGCCCCAGCAACGCCGCGGCGCACGCTGCGTCCGGCGTCTGCGCCACCGTGGCCAGTGACGCGGTGTTCACTCCGATGGACATGGTGAAGCAGAGGCTGCAGCTGGGGAACAGTGGCTACAAGGGGGTTTGGGACTGCGTGAAGAGGGTCATGAGTGAGGAGGGGTTTGGGGCGTTCTATGCGTCTTATAGGACCACTGTTTTGATGAACGCGCCGTTCACTGCCGTGCATTTCACGACGTATGAGGCCGCGAAACGCGGCCTCCTGGAGGTCTCGCCGGAGAGTGTGGATGATGAGAGACTGGTTGTGCACGCCACTGCTGGGGCTGCTGCCGGGGCTTTGGCTGCTGCTGTTACCACGCCACTTGATGTTGTCAAGACTCAATTGCAGTGTCAGGGTGTCTGTGGTTGTGATAGGTTCAAAAGTGGATCAATTGGGGACGTTATCAAAACCATAGTGAAAAAAGATGGATACAGAGGGCTCATGCGAGGATGGATTCCAAGGATGCTCTTTCATGCTCCTGCAGCTGCTATTTGCTGGTCTACATATGAAGCTGGAAAGTCCTTTTTCCAAGATTTCAATCAGCAGAAAGACATTGGCACTGTTACCTAA 975 0.5733 MATDARAKFQNPEFRPDFHADLTVSTHDGLHFWQFMIAGSIAGCVEHMAMFPVDTVKTRMQAIGSCPVKSVTVRHALKSILQSEGPSALYRGIGAMGLGAGPAHAVYFSVYETCKKKFSEGSPSNAAAHAASGVCATVASDAVFTPMDMVKQRLQLGNSGYKGVWDCVKRVMSEEGFGAFYASYRTTVLMNAPFTAVHFTTYEAAKRGLLEVSPESVDDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKSFFQDFNQQKDIGTVT* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1676 324 Pfam Mitochondrial carrier protein 221 313 IPR018108 -
Gso14g1676 324 Pfam Mitochondrial carrier protein 30 120 IPR018108 -
Gso14g1676 324 Pfam Mitochondrial carrier protein 124 210 IPR018108 -
Gso14g1676 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 310 IPR018108 -
Gso14g1676 324 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Gso14g1676 324 PRINTS Mitochondrial carrier protein signature 48 62 IPR002067 GO:0055085
Gso14g1676 324 PRINTS Mitochondrial carrier protein signature 139 157 IPR002067 GO:0055085
Gso14g1676 324 PRINTS Mitochondrial carrier protein signature 181 199 IPR002067 GO:0055085
Gso14g1676 324 PRINTS Mitochondrial carrier protein signature 229 251 IPR002067 GO:0055085
Gso14g1676 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 208 IPR018108 -
Gso14g1676 324 Gene3D Mitochondrial carrier domain 159 323 IPR023395 -
Gso14g1676 324 Gene3D Mitochondrial carrier domain 11 158 IPR023395 -
Gso14g1676 324 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 319 - -
Gso14g1676 324 PANTHER MITOFERRIN-1-RELATED 1 319 - -
Gso14g1676 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 117 IPR018108 -
Gso14g1676 324 SUPERFAMILY Mitochondrial carrier 28 305 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1676 Gso-Chr14 48850144 48853962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1676 131 318 Chloroplast and Mitochondria Gene Families AT1G07030 28.272 6.91e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1676 K15113 - gmx:100802640 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1676 14 48850144 48853962 Gso2g1967 2 44018783 44022223 GST