LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso14g1671	ATGGAAACTCCAGAGGAGTGTCTTCTGCTCGAGGACCTAAGTCAAGTAATGATTCAAAGTAATTCAAATACAGAACTAGTAGATGCTGAAGGTGATAGTACTCTAAATACCCCACCACCAGAAAACGGGGATGCTGATGGTGTTCCTCTTCTGGGTCTGGACTTAGTCACTCAATGCAATTCATCTTCACAGGAAGACAACAGTGATGATGGTCTTATCCCACAGTTCATGGATTGTATAAAAGTGCTTGAGAAGGAGAACGAGATTCTTGTCCCCATGGTTTCAAGTCATGTGGACAAATATCTTAAAGCCATGCTTGACTCCGAATCCAAACCAGAGCTGTCGCCACCGCCACCAGAACTTTATCCTGACGTCAACATGGTGGTGGATGCACTGCCATCAGGAATCGTCACGCGCCTTAGCGACACCGCGAAGCAAATGATGGAAGCCGGGTTTGAGCGGGAATGCTGTGACGCGTACAGCAAATGGCGAAGAGAGTTTCAAGAACAGTGTCTGTCTGCACTTGGGTTGAAATTGCAAGAGCTCAAGATAGAGGACTTTGAGAATTGGATAAAAACTTGCAAGGCAGCGGTAAAGATAATGTTTCCCAATGAAAGGAGACTCAGCAATATTGTCTTCTCGGGGTTTCATAGAGCTGCGGACGTCTCTTTCACGGAGGTTTGCATGAAATTGACGATTTGTCTAGTGAGTTTTGCCGATACCATCATAACAACAACAACAACGACAACAACTGATCAGAGTTATTTGCTGCCAAATTTTTTGTCCAGTGTCATTCCTGAAATGTCGAAATCATTGCATGAGCTGAATCAGGAGTCACTCTTACACGGATTTTGTAAGGACGGTATCTTGCTCGAAGCTGATGTGAAGAAGGTTCATGAAAGATTTGAAATTTTTAAGGCGTTTGCAAATCTTATTTACATTAATACTGCTCAGGAAACTGTCGCCGGTGGAGGAGGGCTTCATCTGATTACCCAGCAAGCAACGAACTACATCGATCATGTTTGTGAATCTTTCGGAGAAACTGTCCGAGAATACAAGATTATTCCTGGAAGAGAGGGAAAATCTTCATTTTCTGAGCTGCTAGCCAGGATGATAGAGTTGTTAGAGAGCATTTTGGAAACCAAGTCCAGAGACGACTACACTGACCCTGCATTGGGCTATGTTTTTATGATGAATAATCTCTGGTACATTGGACAAGAGGCATGTAAATGGAGATCCCTTGTGGACGGAAGAACCATATTAGATGATCATTGGTTCCAACAAAACACAACAAAGGTGGAACAAAACTGTAAACTCTATCAAAGAAGCTCATGGAATAAGATGCTGGACATTTTGAAGCTAGAGGGAAACGAGTCAGTGGCGCCACCTAATGTGGTAGCAGAGTCAATGAAAGATAAGCTCAATTTGTTCAACCTACAGTTTGAGAAGATATACTTCTTTCAATCTACATGGATTCTCTCTGATCATAAGCAACTAAGGGAACAAGTTATAAATTCCATAGACAGCACCTTGTTGCCAGCATATGGAAAATTTATTGACAGGTTTCAGGATGTTCTTGGTGAGCGTGCTTGTGAGTATATTGAGTATGGAATTGTAGACATTCAAAATCGTCTCAGCTGTTTGTTTCTTCTAAGTGAGTAG	1662	0.4236	METPEECLLLEDLSQVMIQSNSNTELVDAEGDSTLNTPPPENGDADGVPLLGLDLVTQCNSSSQEDNSDDGLIPQFMDCIKVLEKENEILVPMVSSHVDKYLKAMLDSESKPELSPPPPELYPDVNMVVDALPSGIVTRLSDTAKQMMEAGFERECCDAYSKWRREFQEQCLSALGLKLQELKIEDFENWIKTCKAAVKIMFPNERRLSNIVFSGFHRAADVSFTEVCMKLTICLVSFADTIITTTTTTTTDQSYLLPNFLSSVIPEMSKSLHELNQESLLHGFCKDGILLEADVKKVHERFEIFKAFANLIYINTAQETVAGGGGLHLITQQATNYIDHVCESFGETVREYKIIPGREGKSSFSELLARMIELLESILETKSRDDYTDPALGYVFMMNNLWYIGQEACKWRSLVDGRTILDDHWFQQNTTKVEQNCKLYQRSSWNKMLDILKLEGNESVAPPNVVAESMKDKLNLFNLQFEKIYFFQSTWILSDHKQLREQVINSIDSTLLPAYGKFIDRFQDVLGERACEYIEYGIVDIQNRLSCLFLLSE*	554

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso14g1671	553	Pfam	Exo70 exocyst complex subunit	188	546	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Gso14g1671	553	MobiDBLite	consensus disorder prediction	28	49	-	-
	Gso14g1671	553	Gene3D	Exocyst complex component Exo70	52	553	-	-
	Gso14g1671	553	SUPERFAMILY	Cullin repeat-like	73	549	IPR016159	-
	Gso14g1671	553	PANTHER	PROTEIN, PUTATIVE-RELATED	111	550	-	-
	Gso14g1671	553	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	111	550	IPR004140	GO:0000145\|GO:0006887

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso14g1671	Gso-Chr14	48816124	48817785	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso14g1671	117	549	EXO70 exocyst subunit family	AT5G58430	37.418	4.05e-76	251

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso14g1671	-		-	gsj:114384171	1080.86

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