Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1651 ATGCCGACTCAAACCGAGTCACCCAGCAACTCACTGAGTCAACTCGCTGAGAACATGTTCTCCGACAACAACCGCAACATCATGCTCGCAGCAATTATTTTCTTGCTCCTAGTTATCCTCTTCGTCCTCCTACTCCATGTGTACGCCAAATGGTTCTTATTCCAGGTACAATCACGTTCCCAGACTCGGCGGCGGCGAACTCCGGTGACCGTCTCCGGCGTTCTGGAACCTTCCCATTTCCACAGCATCAACATAGAAGCCTCACCCACGTGCTCCAAAGGCCTTGATTCGGCCACACTTTCGGCGATTCCCTTGTTTGTGCAAGGACCAGAGAAAACAGAGGAAACGGAGGAATTGGAATGTGTCATTTGCTTGAGCGTTATTGAGGAGGGTGAGATAGGAAGGAGATTGCCGAAGTGTGGCCACGCTTTTCACATGGAGTGCATTGATATGTGGTTGAGTTTACATTGCAATTGTCCAATTTGTAGAGCTCCTATTGTTGTTAGTGGCGATTCTCATTTGGGTTCTGTTGATGGTGATAGTGATGGTGTGGTTGAGATTGGGGTTGTTACACCGGGTTATGAGATTAGTGGGAGTGAACATGGTGGGGTTAGTGGTTCTGTTCCTGAAGCTTCTTCATCTTTGTTGGGTTTCTCTCTGAAGAGATTGCTGAGTAAGGTTTTTCTGTCACCTGATCATGTAACTGAATTAGATGGTTCACATTGA 726 0.4738 MPTQTESPSNSLSQLAENMFSDNNRNIMLAAIIFLLLVILFVLLLHVYAKWFLFQVQSRSQTRRRRTPVTVSGVLEPSHFHSINIEASPTCSKGLDSATLSAIPLFVQGPEKTEETEELECVICLSVIEEGEIGRRLPKCGHAFHMECIDMWLSLHCNCPICRAPIVVSGDSHLGSVDGDSDGVVEIGVVTPGYEISGSEHGGVSGSVPEASSSLLGFSLKRLLSKVFLSPDHVTELDGSH* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1651 241 CDD RING-H2_EL5_like 121 163 - -
Gso14g1651 241 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Gso14g1651 241 SUPERFAMILY RING/U-box 111 169 - -
Gso14g1651 241 Pfam Ring finger domain 120 163 IPR001841 -
Gso14g1651 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 167 IPR013083 -
Gso14g1651 241 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 1 236 IPR044675 -
Gso14g1651 241 PANTHER - 1 236 - -
Gso14g1651 241 SMART FANCL_C_2 117 171 - -
Gso14g1651 241 SMART ring_2 121 162 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1651 Gso-Chr14 48598557 48600647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1651 26 164 Rapid Response to Elicitors AT3G16720 38.298 1.37e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1651 - - gmx:100777829 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1651 14 48598557 48600647 Gso2g1946 2 43787440 43788881 GST
Gso18g0536 18 5536531 5537640 Gso14g1651 14 48598557 48600647 PCT
Gso14g1651 14 48598557 48600647 Gso18g0536 18 5536531 5537640 PCT