Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1645 ATGTCTTGCTCCGTCGCGGTTTCCAATTCGCCGGTGTTCTCTCCTTCTTCTTCCCTCTTCTGCTCGAAGCCCTCCATCATCTCTTCTTCGCCGGAATCCCTCTCCCTCTCTCTGTCGCATCTCAAACCTTCGAACTCTTCTACGTCGTCGTCTTGTTCTTCGCCTTCTGCTGCTGCTGCTTCTTCTTCTCCTTCTTCTCCGTTTCGACTTCGCCTTCCCAAGCCTCCCACCGCGTTCTCCGCGTCTTCTGCTGCTTCTGCTTCGTCTACCTCTCCGAACGGCACCGTTTTGAAGAGGAAGCGACCCGCTAGGTTGGACATACCCGTTTCCTCCCTCACCTTTGCGGTTCCGCTCACGCCCTCCGTGGCGGCGCGTGACGTGGTTGAGGCTGAGGAAGATGGGTTTGGGGTGTCCTGCAAGAGAGGGAGGAGGGAGTATATGGAGGATCGTTACACAGCTGGGGATAATCTTCGCGGAGAACACAAACTGGCTTTTTTTGGCATATTTGATGGGCACGGTGGTGCAAAAGCTGCTGAATTTGCTGCAAGTAACTTAGAAAAGAATGTGTTAGATGAAGTAATCGTGAGAGATGAAGATAATGTTGAGGAGGCAGTGAAGCGAGGGTACCTAAACACCGATTCGGATTTCCTAAAGGAGGATCTTCATGGTGGCTCTTGCTGTGTGACAGCATTGATTAGGAATGGTAACCTCATTGTGTCCAACGCTGGTGATTGCCGCGCTGTCATTAGCAGAGGGGGTGTTGCTGAGGCTCTAACATCTGATCACAGGCCTTCAAGGGAAGATGAAAGGGACAGAATTGAGAACCTGGGTGGCTATGTTGATTTATGCCGTGGTGTTTGGAGGATCCAGGGATCTCTTGCTGTGTCTAGGGGAATTGGAGATAGACACCTGAAACAATGGGTGACAGCAGAGCCTGAGACCAAAGTTCTCAGAATTGAACCTGAACATGACTTGTTAATCTTAGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAGGAAGCAGTAGATACTGCTCGTTCTTTTCTCGTAGGCAACAACAAATCACAACCATTGCTGCTGGCTTGTAAAAAGCTTGTAGATTTGTCTGTTTCACGAGGCTCTTTGGATGACACAAGTGTTATGCTAATCAAATTGGAGCACTATATTTGA 1173 0.4919 MSCSVAVSNSPVFSPSSSLFCSKPSIISSSPESLSLSLSHLKPSNSSTSSSCSSPSAAAASSSPSSPFRLRLPKPPTAFSASSAASASSTSPNGTVLKRKRPARLDIPVSSLTFAVPLTPSVAARDVVEAEEDGFGVSCKRGRREYMEDRYTAGDNLRGEHKLAFFGIFDGHGGAKAAEFAASNLEKNVLDEVIVRDEDNVEEAVKRGYLNTDSDFLKEDLHGGSCCVTALIRNGNLIVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIENLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVLRIEPEHDLLILASDGLWDKVSNQEAVDTARSFLVGNNKSQPLLLACKKLVDLSVSRGSLDDTSVMLIKLEHYI* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1645 390 MobiDBLite consensus disorder prediction 36 68 - -
Gso14g1645 390 Gene3D - 124 389 IPR036457 -
Gso14g1645 390 SMART PP2C_4 124 384 IPR001932 -
Gso14g1645 390 Pfam Protein phosphatase 2C 134 378 IPR001932 -
Gso14g1645 390 MobiDBLite consensus disorder prediction 36 102 - -
Gso14g1645 390 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 389 - -
Gso14g1645 390 PANTHER PROTEIN PHOSPHATASE 2C 3 389 IPR015655 GO:0004722|GO:0006470
Gso14g1645 390 ProSiteProfiles PPM-type phosphatase domain profile. 134 386 IPR001932 -
Gso14g1645 390 MobiDBLite consensus disorder prediction 79 96 - -
Gso14g1645 390 CDD PP2Cc 134 386 IPR001932 -
Gso14g1645 390 ProSitePatterns PPM-type phosphatase domain signature. 165 173 IPR000222 GO:0043169
Gso14g1645 390 SUPERFAMILY PP2C-like 135 387 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1645 Gso-Chr14 48520364 48522687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1645 1 390 PP2C-type Phosphatase Gene Family AT2G30020 64.356 4.82e-168 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1645 K17506 - gmx:100795728 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1645 14 48520364 48522687 Gso2g1940 2 43708531 43710992 GST
Gso18g0540 18 5583291 5585464 Gso14g1645 14 48520364 48522687 PCT
Gso14g1645 14 48520364 48522687 Gso18g0540 18 5583291 5585464 PCT