Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1629 ATGCACATGAACACCTACTCTGAAGCCACCACATCACAACCAATGCCACCCACCATGGATGAAGATTTGGAGAACAACACGGAGGATTGCAACAATGCAATGACTCCGATGGTGAGAAAGAAGTCAGAACTAGTTGTGGTCACAAATAATGACTCTCGTTTCCAAATGCTTAGAAATTTCATGACCAATTTGCAAGAGGTCATCTTCGGTACTAAGCTTGTGGTGCTTTTTCCGGCAGTCCCTTTGGCTGTTGTTGCAAATTTTTATAGCTTTGGAAGGCCTTGGATTTTTGCTTTCAGCCTACTTGGACTTGCTCCGCTAGCTGAACGTGTTAGCTTCCTGACTGAGCAAATTGCATATTTCACCGGCCCAACAGTTGGAGGGCTTCTGAATGCAACATGTGGAAATGCAACCGAGATGATCATAGCATTATTAGCACTTCACCAGAACAAAGTTCATGTTGTGAAGTTGTCTTTGCTGGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGCAGTTCACTCCTCTGTGGTGGTTTAGCCAATCTTAAGAGAGAACAAAGATATGACAGAAAGCAGGCAGATGTAAACTCACTGCTTTTGTTGCTGGGGTTACTGTGCCATTTGCTGCCATTGCTATTCAAATACGCCTTAGGAGGAGGCAATCATTCTATAGCCACTAGCACTCTTCAGTTGTCAAGAGCAAGCAGCATTGTTATGCTTCTAGCATATGTTGCTTACATCTTCTTCCAATTGAAAACCCATAGAAAATTGTTTGATGCACAAGAGGTGGACGAAGAAGAGGAAAAGGCAGTGATAGGATTTTGGAGTGCATTTACGTGGTTGGTGGGTATGACATTGGTCATATCTCTGCTTTCTGAATATGTTGTGGGAACTATTGAGGCTGCTTCAGATTCTTGGGGCATTTCTGTAAGCTTCATTAGCATAATTTTGCTGCCAATTGTTGGAAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATATCTTTGGGTGTTGCCATGGGATCTGCAACCCAAATTTCTATGTTTGTGGTTCCATTAAGTGTAGTTGTTGCATGGATAATGGGTATAAGAATGGATTTGGACTTCAGTCTTCTTGAAACTGGATGCCTTGCTTTTACAATTATAATTACAGCGTTCACTTTACAGGATGGAACTTCACACTACTTGAAAGGAGTGATTCTTACACTATGTTACGTGGTCATTGGTGCATGTTTTTTTGTTCTCAAAACTCCTCTAATTGGGCAATCTCCTAAGGCCAGTTTTGGAGCTAAAACCATCCTTTGA 1329 0.4184 MHMNTYSEATTSQPMPPTMDEDLENNTEDCNNAMTPMVRKKSELVVVTNNDSRFQMLRNFMTNLQEVIFGTKLVVLFPAVPLAVVANFYSFGRPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHQNKVHVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFKYALGGGNHSIATSTLQLSRASSIVMLLAYVAYIFFQLKTHRKLFDAQEVDEEEEKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFSLLETGCLAFTIIITAFTLQDGTSHYLKGVILTLCYVVIGACFFVLKTPLIGQSPKASFGAKTIL* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1629 442 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 431 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso14g1629 442 PANTHER VACUOLAR CATION/PROTON EXCHANGER 24 431 - -
Gso14g1629 442 TIGRFAM caca2: calcium/proton exchanger 59 421 - -
Gso14g1629 442 MobiDBLite consensus disorder prediction 1 20 - -
Gso14g1629 442 TIGRFAM cax: calcium/proton exchanger 78 421 IPR004798 GO:0006816|GO:0015369
Gso14g1629 442 Pfam Sodium/calcium exchanger protein 95 252 IPR004837 GO:0016021|GO:0055085
Gso14g1629 442 Pfam Sodium/calcium exchanger protein 278 416 IPR004837 GO:0016021|GO:0055085
Gso14g1629 442 Gene3D - 124 421 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1629 Gso-Chr14 48287357 48292543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1629 31 426 Antiporters AT2G38170 67.327 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1629 K07300 - gmx:100816844 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1629 14 48287357 48292543 Gso2g1926 2 43500586 43506552 GST
Gso18g0558 18 5864181 5869488 Gso14g1629 14 48287357 48292543 PCT
Gso14g1629 14 48287357 48292543 Gso18g0558 18 5864181 5869488 PCT