Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1621 ATGGTCAGAGGAGGAAGTCAAGGTGGTGACAATAATGGCTTCCAAATTTATGGGTGTGAAGTTATAAACGCTAGCAACAACCCTCCTTTGACAGCCATAGGCATAGATAGGTTCTTATGTGGCCACTTTCCTCACCAGCAACAACATGCAAGGAATTACAATGCTGCAAATGTTTTTGCTGATGAGGAGGCTTTTAATAATAAGTGGACACACATCAACCAAACCCCTACATTATGCCTGAAAGGTATGCATGTTTTAGGTAAGAATGCGAAAGTGGTGCGAAGAAGAAGCAAGAAAAAACAGTCTCCTGTGTGTTGGATCAAAGGACAGTGGAATAAAGAAGAGGACAGGAAACTGATAAGGTTGGTGAAGCAATATGGTGAAAGAAAATGGGCTGAAATAGCTGAGAAGTTGGAGGGAAGGGTTGGTAAGCAGTGTCGAGAAAGATGGAATAATCATTTACGTCCTGATATTAAGAAAGATAGTTGGAGTGAAGAAGAAGAGAGGATACTAGTAGACACCCATGCGAGGCTCGGAAATCGTTGGTGTGAGATAGCAAAACACATTACAGGAAGATCAGAGAATGCCATAAAGAACCATTGGAATGCCACCATAAGGAGACAGAATTCAAAGAGAAAGAACAAGAAGACAAAAAGCTCTATTAATGGAAAGCCACATTCCTCTATACTTGAAGACTACATCAGAAGCCAGAATCAAACAACTAGTAGCAACCCCACACCTGGCATCATCACTGCCACAGATACCATCCACACAACACTCTCACAGGACAATGCTGCAAATTTGGCTAATGATCTACTCTTCATGAAACAAATTTTCAAGGAGAATGTTGAAGTCTCTAAGCACTCTAAGATGCCTTCAACCTCATACTTGGATTATTGTCAAATGAATGTTGATGATGTGGGTGAGTGTGAGTATTCCCTCCAATACCTAGATATTAATAACATTAACATGCACTTGAATGATGCTAGTCTCTTCCCTAGAGAGACTCATCCTACCCACATAAGTTATCTACCTTCGGATCTCCATCTCTCTCACTTGTTCAACGTGGCACCTGGTTATGGGAATCAAAATGGATTTTCGACATCAAGGTTGTTCAGAAGTTAA 1125 0.4089 MVRGGSQGGDNNGFQIYGCEVINASNNPPLTAIGIDRFLCGHFPHQQQHARNYNAANVFADEEAFNNKWTHINQTPTLCLKGMHVLGKNAKVVRRRSKKKQSPVCWIKGQWNKEEDRKLIRLVKQYGERKWAEIAEKLEGRVGKQCRERWNNHLRPDIKKDSWSEEEERILVDTHARLGNRWCEIAKHITGRSENAIKNHWNATIRRQNSKRKNKKTKSSINGKPHSSILEDYIRSQNQTTSSNPTPGIITATDTIHTTLSQDNAANLANDLLFMKQIFKENVEVSKHSKMPSTSYLDYCQMNVDDVGECEYSLQYLDINNINMHLNDASLFPRETHPTHISYLPSDLHLSHLFNVAPGYGNQNGFSTSRLFRS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1621 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 209 IPR017930 -
Gso14g1621 374 MobiDBLite consensus disorder prediction 207 229 - -
Gso14g1621 374 SUPERFAMILY Homeodomain-like 107 201 IPR009057 -
Gso14g1621 374 Gene3D - 161 228 - -
Gso14g1621 374 Gene3D - 107 159 - -
Gso14g1621 374 ProSiteProfiles Myb-like domain profile. 108 154 IPR001005 -
Gso14g1621 374 CDD SANT 162 202 IPR001005 -
Gso14g1621 374 Pfam Myb-like DNA-binding domain 111 168 - -
Gso14g1621 374 CDD SANT 111 154 IPR001005 -
Gso14g1621 374 ProSiteProfiles Myb-like domain profile. 155 205 IPR001005 -
Gso14g1621 374 PANTHER MYB PROTEIN-RELATED 5 374 - -
Gso14g1621 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 158 IPR017930 -
Gso14g1621 374 SMART sant 107 156 IPR001005 -
Gso14g1621 374 SMART sant 159 207 IPR001005 -
Gso14g1621 374 PANTHER MYB TRANSCRIPTION FACTOR 5 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1621 Gso-Chr14 48212786 48214482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1621 28 355 MYB Transcription Factor Family AT5G11050 41.160 6.03e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso14g1621 Myb_DNA-bind_6 2.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1621 K09422 - gmx:102666818 749.969