Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1605 ATGAAGAAAACACCACCCCCCAATTTGCATCAATCTAGCCAAAGTAGACAGAATGCTAATCTCCAATTTGTTGGAACAAACAATGATGCAAAGAGGCACAGTTCTAAGACACTGAGATCTTTGAAGTATGCTGCCAAGAAATGTGCAGCTGTTTTTTCATTGTTTCTCTATGGCAAAAGAAAATCAGCCTCATATGTTGTTGGGAATGATGGCAGAAAGAATACATCCAAAGTTAGAGGGGTGGTATCATCATCAACTGATTTGTCATCTGAGAGTACCACCAAGAATTCATCAAAATGGAAGTTTTCTTATTCTTACGCATCATCCATTACTGCAAGTGGACAACTTGGAATTGGCAACTTTTCCTTTGAAGAAATTTACAAGTCAACTGCAAAATTCTCTCCAGCTAATGAAATTGGGCAAGGTGGCTTTGGAACTGTCTACAAGGGAAAGCTTAATGATGGATCTATTGTTGCCGTGAAGCGTGCCAAGAAGGATGTAATACACAATCACTTACATGAGTTCAAGAATGAAATATACACCTTGTCACAAATTGAGCATCGGAATCTTGTGAGGTTGTATGGATATTTGGAGCATGGAGATGAGAAGATTATTGTTGTTGAATACGTTGGTAATGGTAACCTTCGAGAACATCTAAATGGTATTCGGGGAGAAGGACTAGAAATTGGGGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAGTAACTTACCTGCATATGTACACAGATAATCCAATTATCCATAGAGACATCAAAGCATCGAACATCTTAATCACTGAGAACCTAAAGGCCAAAGTGGCAGATTTTGGATTTGCACGGTTGTCTGATGATCCTAATGCAACTCATATTTCAACTCAAGTTAAAGGAACAGCTGGATACATGGATCCTGAGTATCTTAGAACATACCAACTAACTGAAAAGAGTGATGTTTATTCCTTTGGTGTATTGCTTGTTGAAATGGTGACAGGACGGCATCCAATAGAACCAAAGAGACCAGTTGATGAGAGAGTTACAATCAGATGGGCAATGAAGATGCTGAAACAAGGGGATGCTGTATTTGCCATGGACCCTAGGCTGAGAAGAAATCCAGCCTCCATCAAGGCAGTAAAGCAGGTTCTCAAGCTAGCTCTCCAATGTGTTGCGCCTTCAAAACAATCACGGCCGCCTATGAAGAATTGTGCAGAGGTTCTGTGGGACATCCGCAAAAGTTTTAGAGATGAAGCCAATTCTGATCATCCTCCCCTTCCTTCTCACCATTCTGCAAACTTTCCTCAAAGAGAAAAGAATAAGTTTGGTATTGAAGATGATGACAGCTATAAATTTGTCTCTGTACCTAATCATATTCGTTCATAA 1377 0.4001 MKKTPPPNLHQSSQSRQNANLQFVGTNNDAKRHSSKTLRSLKYAAKKCAAVFSLFLYGKRKSASYVVGNDGRKNTSKVRGVVSSSTDLSSESTTKNSSKWKFSYSYASSITASGQLGIGNFSFEEIYKSTAKFSPANEIGQGGFGTVYKGKLNDGSIVAVKRAKKDVIHNHLHEFKNEIYTLSQIEHRNLVRLYGYLEHGDEKIIVVEYVGNGNLREHLNGIRGEGLEIGERLDIAIDVAHAVTYLHMYTDNPIIHRDIKASNILITENLKAKVADFGFARLSDDPNATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMVTGRHPIEPKRPVDERVTIRWAMKMLKQGDAVFAMDPRLRRNPASIKAVKQVLKLALQCVAPSKQSRPPMKNCAEVLWDIRKSFRDEANSDHPPLPSHHSANFPQREKNKFGIEDDDSYKFVSVPNHIRS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1605 458 PANTHER OS01G0253100 PROTEIN 1 438 IPR045271 GO:0004714|GO:0006468
Gso14g1605 458 Gene3D Transferase(Phosphotransferase) domain 1 210 423 - -
Gso14g1605 458 SMART serkin_6 133 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1605 458 ProSitePatterns Protein kinases ATP-binding region signature. 139 165 IPR017441 GO:0005524
Gso14g1605 458 SUPERFAMILY Protein kinase-like (PK-like) 115 406 IPR011009 -
Gso14g1605 458 ProSiteProfiles Protein kinase domain profile. 133 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g1605 458 Pfam Protein tyrosine and serine/threonine kinase 137 405 IPR001245 GO:0004672|GO:0006468
Gso14g1605 458 CDD STKc_IRAK 139 405 - -
Gso14g1605 458 MobiDBLite consensus disorder prediction 75 95 - -
Gso14g1605 458 MobiDBLite consensus disorder prediction 415 442 - -
Gso14g1605 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Gso14g1605 458 PANTHER OS02G0821400 PROTEIN 1 438 - -
Gso14g1605 458 Gene3D Phosphorylase Kinase; domain 1 91 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1605 Gso-Chr14 48049549 48053328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1605 105 398 Receptor kinase-like Gene Family AT1G79620 44.518 6.57e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Gso14g1605 PK_Tyr_Ser-Thr 6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1605 - - gmx:100811511 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1605 14 48049549 48053328 Gso2g1907 2 43332319 43336485 GST
Gso14g1605 14 48049549 48053328 Gso18g0880 18 12149375 12154644 PCT
Gso14g1605 14 48049549 48053328 Gso8g2563 8 43079095 43084324 PCT