Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1603 ATGGGTTACTTATGTGATTTTTGTGGAGACCAGAGGTCCCTGGTGTACTGCCGCTCTGATGCTGCGTGCTTATGTTTGTCGTGTGATCGAAATGTTCATTCTGCTAATGCCCTTTCTAGGCGTCATTCGAGAACCCTTGTATGCGAGAGATGCAATTCGCAACCTGCATTTGTGAGGTGTGTTGATGAGAAGATTTCACTTTGTCAGAACTGTGATTGGTTGGGTCATGGTACCTCACCATCTTCTTCGACACACAAGAGGCAATCAATCAATTGCTACTCTGGCTGCCCTTCAGCTGCAGAATTTTCTTCAATATGGTCCTTTTTCTTAGACATCCCTTCTATGGGTGAAGCATGTGAGCAGGAACTAGGTTTGATGAGCATTAATGAGAACAGCAATAAGAATGCTTGGGCTTCTCCAGAAGGGCAGAATGTGTCTGGTTCAGCTGAAGTGACTGATCTACCCAGCAAGGGTAAATCTTGGGCTGGCACATCTTCAGTACCTGAGTCAAGCTCAGAACCTCGTATTCTAGACCAGCCGCCTGGACCTGCCAATGAATGTATGCCCAAGTTGTACTGTCCTGGGAAGAAAGTTTCTGGAATATATGAAGATGATGATCTATATGATGATTTCATCATGGATGAAGTGGATCTACAACTTGAGAACTACGAGGAACTTTTTGGGATGGCTCTCAGTCACTCTGAAGAGCTTTTTGAAAATGGTGGAATTAATAGCTTATTTGAGACAAAGGACATGTCTGCTAGTGCTGGTGATTCCCATTGTCAGGGTGCTGTTGCTGCTGAGGGATCGTCTGCTGAGTTGGTCAATGCTATCCAACCAGCATGCAGCAATGCAGCATCTGCAGACTCAATGATGAGTACAAAAACTGAACCAATTGTTTGTTTTACGGCAAGGCAATCTCTATCAAACATTTCTTTCTCTGGTGTTACCAAAGATAGTGTTGGTGACTATCAAGATTGTGGTGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCCTGGTGTCCTCCTTGCCCTGAGAGTTCTCTGCATTCTGCTAACCGCAGCAATGCTGTCATGCGCTATAAGGAAAAGAAGAAGACCCGGAAGTTCGAGAAGAAAGTAAGGTATGCCTCTCGCAAGGCTAGGGCTGATGTCAGAAAGCGTGTGAAGGGTCGATTTGTCAAAGCCGGTGATGTCTATGACTATGACCCTTTGAACCAAACCAGAAGCTGCTGA 1236 0.4539 MGYLCDFCGDQRSLVYCRSDAACLCLSCDRNVHSANALSRRHSRTLVCERCNSQPAFVRCVDEKISLCQNCDWLGHGTSPSSSTHKRQSINCYSGCPSAAEFSSIWSFFLDIPSMGEACEQELGLMSINENSNKNAWASPEGQNVSGSAEVTDLPSKGKSWAGTSSVPESSSEPRILDQPPGPANECMPKLYCPGKKVSGIYEDDDLYDDFIMDEVDLQLENYEELFGMALSHSEELFENGGINSLFETKDMSASAGDSHCQGAVAAEGSSAELVNAIQPACSNAASADSMMSTKTEPIVCFTARQSLSNISFSGVTKDSVGDYQDCGASSMLLMGEPPWCPPCPESSLHSANRSNAVMRYKEKKKTRKFEKKVRYASRKARADVRKRVKGRFVKAGDVYDYDPLNQTRSC* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1603 411 CDD Bbox1_BBX-like 4 47 - -
Gso14g1603 411 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Gso14g1603 411 Pfam CCT motif 354 396 IPR010402 GO:0005515
Gso14g1603 411 MobiDBLite consensus disorder prediction 136 173 - -
Gso14g1603 411 ProSiteProfiles CCT domain profile. 354 396 IPR010402 GO:0005515
Gso14g1603 411 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Gso14g1603 411 MobiDBLite consensus disorder prediction 136 183 - -
Gso14g1603 411 CDD Bbox1_BBX-like 47 90 - -
Gso14g1603 411 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 410 - -
Gso14g1603 411 SMART bboxneu5 4 47 IPR000315 GO:0008270
Gso14g1603 411 SMART bboxneu5 48 90 IPR000315 GO:0008270
Gso14g1603 411 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1603 Gso-Chr14 48025628 48033062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1603 1 410 C2C2-CO-like Transcription Factor Family AT5G48250 56.501 2.67e-148 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Gso14g1603 CCT 7.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1603 - - gmx:100783016 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1603 14 48025628 48033062 Gso2g1904 2 43308497 43315906 GST