Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1602 ATGGGCCTCTCTAGTCTCCCAGCACCATCTGAAGGAGTATTATGTGTCCTTCTGGTGAACACTGTATTGTCAATTTCCATATTCAAAGGCATTGTAAGGACAATCCTGCACATTGTTGGCATCCATCTTCCATCATCCTCCACTTCACCCTCTTCACCAGATCCCTCCCAAGCCGCACCTGAGTCATTTGAATTGCATCTTAGTCCCTCGGAGAGTTACATTGAAGAGTTCAGAAGCCGGACACCGACACTTCGGTTTGACAGTGTGTGCTGCTCTAAACGACTTGAACATGACTGCTCTGTATGCCTCACTCAGTTTGAACCCGAATCAGAGATAAACCGCTTATCGTGCGGTCATCTCTTCCACAAAGTGTGCTTGGAGAAGTGGCTGGACTACTGGAACATTACATGCCCACTTTGCCGGACTCCCTTGATGCCCGAAGATGACACACCTTGCTTTCAGTAA 465 0.4796 MGLSSLPAPSEGVLCVLLVNTVLSISIFKGIVRTILHIVGIHLPSSSTSPSSPDPSQAAPESFELHLSPSESYIEEFRSRTPTLRFDSVCCSKRLEHDCSVCLTQFEPESEINRLSCGHLFHKVCLEKWLDYWNITCPLCRTPLMPEDDTPCFQ* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1602 154 Pfam Ring finger domain 98 141 IPR001841 -
Gso14g1602 154 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 152 - -
Gso14g1602 154 SUPERFAMILY RING/U-box 98 147 - -
Gso14g1602 154 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Gso14g1602 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 146 IPR013083 -
Gso14g1602 154 PANTHER - 1 152 IPR044249 -
Gso14g1602 154 SMART ring_2 99 140 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1602 Gso-Chr14 48020942 48022887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1602 1 148 C3H Transcription Factor Family AT2G04240 64.935 2.79e-60 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1602 K16285 - gmx:100305532 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1602 14 48020942 48022887 Gso2g1903 2 43304323 43306155 GST