Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1593 ATGGGTGCTGTTGTGGAGTGCTACCCGCCGCCTCGCACGGCGGTGCTGTCCCTCAACACGCTGCCGTTAGGGTTCCGTTTCCGTCCCACCGATGAGGAGCTTATTGACTACTACCTGCGCTCGAAGATCAACGGAAATAGTGACGATGTTTGGGTTATTCGTGAGATTGATGTCTGCAAATGGGAGCCTTGGGACTTGCCTGATTTGTCAGTGGTACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGACCGGAAGTATCCAAACGGGCACAGGTTGAACCGAGCTACGAATCATGGCTATTGGAAGGCGACGGGGAAGGATCGAAAGATTAAGTCTGGCTCCACCTTGATTGGAATGAAGAAGACTCTTGTTTTCTATACCGGTCGTGCTCCCAAGGGGAAGAGGACCAATTGGGTTATGCATGAGTACAGGCCTACCTTGAAGGAGCTTGAAGGAACCAATCCTGGACAGAATCCATATGTCCTTTGTCGATTATTTAAGAAACAAGATGAGAGTCTTGAAGCTTCAAACGGTGATGATGTGGAGCGGACTGCTTCAACTCCTACAACTGCCAATTACTCTCCCGACGAAATACAATCTGATTCAGCTCTGGTTCCAGCATCTTCCTCACAGGTTACTGAAGATGATAAGCCTCTACCAGTTATTTCCGAGAACTCCGAGGAAGCAATATCCAACATTATAACCCCTGGTGATATTCATAGTGACGAATGTGATGCTCCTGATGCACAATATCAAATTGTTGAACCAGTTGCAGAGGAGGATCAGCTGTTGAGCGTGGACATATTTTATGACCCAACAAATCAGCAATTAGACGACAAATTGTTCTCCCCTGTCCATGCACATTTACCAGCAGATTTTTATTATCAAGCTAACAATCAATCAGAACTTCAGTATGGTACAAGTGAGAATATTTCAGAATTTTTTGACTCTGTTGTTAATTGGGATTCATTCTCTTATGCTACCAGCAGTCTAGATCTGGGCTCATCCTTCCTTAATCCTAAGGACAATGGATCAGGCAGTGACTCAGATGTGGAAATGGCCAATATGCTGCATCTGCAAGCATTACATGATTATCCTAAGGAGGCAGTTGAGGAGAAGTTCAATGTAGGATTATTTCAGAACAATCCCCAGATGGCTTTCTCAAATGATGGTCCTATGGGCCAAGTGCACAATGTGGCCAACTATTGTGAGCAACCAAGAAACTTTGATGCATTTGTTAATGGTGATACTGGAATCAGAATAAGGACTCGTCATGGAAGAAATGAACAGCCAAACATGAACATGATGATACAATCACAAGGTATTGCACCAAGGAGAATACGATTGGGAGTTGTTAGGCGTCCGCTTGGTTCTCAGGAGACAGCAAAAGATGGGAGTTGTGCTTGTGCCCCAGAAGACCATAACTCAAAAACCATCATTAGTGCGGAGAAGAAAGCTTCAGAAAACCATGCTGCTGATGAGAGTTCCACTGTTTCTGATGAGAGTTCCACTGTTACTGATGATTCTGATGAACCAGAGGAGGCATCTCCCAAGTCAACTGACCCGAGAAAGATAAGTCAGCAACATGTTGCAACTGCAGAATCCATCTCGGGGTCGAAAGACCTTCTAGTGAGCAGAAGGGGCTGCTACACCTCAAAGGTTTCCTCTAATTGCGCCACGTGGTCTTATGTTCTTGCAGTTTCTGCAACTGTATTGGTCTCAGCAATACTCCTTGTTAATATATGGGCATATGTCAGATCTTAA 1773 0.4518 MGAVVECYPPPRTAVLSLNTLPLGFRFRPTDEELIDYYLRSKINGNSDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELEGTNPGQNPYVLCRLFKKQDESLEASNGDDVERTASTPTTANYSPDEIQSDSALVPASSSQVTEDDKPLPVISENSEEAISNIITPGDIHSDECDAPDAQYQIVEPVAEEDQLLSVDIFYDPTNQQLDDKLFSPVHAHLPADFYYQANNQSELQYGTSENISEFFDSVVNWDSFSYATSSLDLGSSFLNPKDNGSGSDSDVEMANMLHLQALHDYPKEAVEEKFNVGLFQNNPQMAFSNDGPMGQVHNVANYCEQPRNFDAFVNGDTGIRIRTRHGRNEQPNMNMMIQSQGIAPRRIRLGVVRRPLGSQETAKDGSCACAPEDHNSKTIISAEKKASENHAADESSTVSDESSTVTDDSDEPEEASPKSTDPRKISQQHVATAESISGSKDLLVSRRGCYTSKVSSNCATWSYVLAVSATVLVSAILLVNIWAYVRS* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1593 590 MobiDBLite consensus disorder prediction 176 220 - -
Gso14g1593 590 Pfam No apical meristem (NAM) protein 22 147 IPR003441 GO:0003677|GO:0006355
Gso14g1593 590 SUPERFAMILY NAC domain 14 171 IPR036093 GO:0003677|GO:0006355
Gso14g1593 590 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 16 437 - -
Gso14g1593 590 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 437 - -
Gso14g1593 590 MobiDBLite consensus disorder prediction 182 219 - -
Gso14g1593 590 MobiDBLite consensus disorder prediction 487 535 - -
Gso14g1593 590 ProSiteProfiles NAC domain profile. 21 171 IPR003441 GO:0003677|GO:0006355
Gso14g1593 590 Gene3D NAC domain 30 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1593 Gso-Chr14 47893279 47897243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1593 14 452 NAC Transcription Factor Family AT4G35580 44.835 1.77e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso14g1593 NAM 3.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1593 - - gmx:100778903 1163.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1593 14 47893279 47897243 Gso2g1894 2 43163914 43168012 GST
Gso14g1593 14 47893279 47897243 Gso4g1899 4 49213301 49216629 PCT
Gso4g1899 4 49213301 49216629 Gso14g1593 14 47893279 47897243 PCT