Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso14g1583 | ATGAGAGGAAGGAGCTATAGTCCATCGCCTCCTCCACGCCACAGCAGAAGAGGAGGAGGAGGGAGGAGTCCCAGCCCCAGGGGCCGCTATCCTCCCCGTCCCAGACAACAAGATCTCCCTACCAGCCTTCTTGTCCGTAACCTTCGTCATGACTGTAGGCCTGAGGATCTACGCCGACCTTTTGGTCAATTTGGTCCTCTCAAGGACATTTACCTTCCTAAGGATTACTACACTGGAGAACCCCGTGGCTTTGGTTTTGTCCAATATGTGGATCCTGCGGATGCTGCTGATGCTAAATATCATATGGATGGTCAAGTTCTTCTTGGTCGGGAGCTCACTGTTGTCTTTGCTGAGGAGAATAGAAAGAAGCCAACTGAGATGAGGACACGAGAGAGAAGGGGTCGCTTTAATGATCGAAGGAGGTCTCCTCCTCGTTACTCTCGGTCACCCCGCTACTCTCGATCTCCACCACCACGCCATAGATCTCGTTCTCGCAGTCGTGATTATTATTCTCCTCCTGCCAAACGAAGGGAGTATTCAAGATCTGTCTCCCCTGAGGATAGAAGGTACAGTCGAGAAAGATCATTTTCACAGCATAGTAGAGAGAGGTCATACTCACGATCTCCTCCTTATAATGGGGGCTCAAGGAGTCGTAGTCAGAGTCCAGCAAAGGGCCCAGGTCAGAGCAGGAGTCCAAGTCCGAACCGAGATGGAAGGGAACCAGCCCGGGGTAGGTCCCCTAGTCAGTGA | 750 | 0.5213 | MRGRSYSPSPPPRHSRRGGGGRSPSPRGRYPPRPRQQDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRERRGRFNDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPAKRREYSRSVSPEDRRYSRERSFSQHSRERSYSRSPPYNGGSRSRSQSPAKGPGQSRSPSPNRDGREPARGRSPSQ* | 250 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso14g1583 | 249 | SUPERFAMILY | RNA-binding domain, RBD | 40 | 147 | IPR035979 | GO:0003676 | |
Gso14g1583 | 249 | MobiDBLite | consensus disorder prediction | 120 | 249 | - | - | |
Gso14g1583 | 249 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 43 | 112 | IPR000504 | GO:0003723 | |
Gso14g1583 | 249 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Gso14g1583 | 249 | PANTHER | SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A | 1 | 233 | - | - | |
Gso14g1583 | 249 | MobiDBLite | consensus disorder prediction | 120 | 145 | - | - | |
Gso14g1583 | 249 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 41 | 119 | IPR000504 | GO:0003723 | |
Gso14g1583 | 249 | Gene3D | - | 33 | 149 | IPR012677 | - | |
Gso14g1583 | 249 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 1 | 233 | - | - | |
Gso14g1583 | 249 | MobiDBLite | consensus disorder prediction | 202 | 235 | - | - | |
Gso14g1583 | 249 | MobiDBLite | consensus disorder prediction | 162 | 201 | - | - | |
Gso14g1583 | 249 | SMART | rrm1_1 | 42 | 115 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso14g1583 | Gso-Chr14 | 47787653 | 47790651 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso14g1583 | 41 | 172 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 26.515 | 5.57e-10 | 57.4 |