Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1583 ATGAGAGGAAGGAGCTATAGTCCATCGCCTCCTCCACGCCACAGCAGAAGAGGAGGAGGAGGGAGGAGTCCCAGCCCCAGGGGCCGCTATCCTCCCCGTCCCAGACAACAAGATCTCCCTACCAGCCTTCTTGTCCGTAACCTTCGTCATGACTGTAGGCCTGAGGATCTACGCCGACCTTTTGGTCAATTTGGTCCTCTCAAGGACATTTACCTTCCTAAGGATTACTACACTGGAGAACCCCGTGGCTTTGGTTTTGTCCAATATGTGGATCCTGCGGATGCTGCTGATGCTAAATATCATATGGATGGTCAAGTTCTTCTTGGTCGGGAGCTCACTGTTGTCTTTGCTGAGGAGAATAGAAAGAAGCCAACTGAGATGAGGACACGAGAGAGAAGGGGTCGCTTTAATGATCGAAGGAGGTCTCCTCCTCGTTACTCTCGGTCACCCCGCTACTCTCGATCTCCACCACCACGCCATAGATCTCGTTCTCGCAGTCGTGATTATTATTCTCCTCCTGCCAAACGAAGGGAGTATTCAAGATCTGTCTCCCCTGAGGATAGAAGGTACAGTCGAGAAAGATCATTTTCACAGCATAGTAGAGAGAGGTCATACTCACGATCTCCTCCTTATAATGGGGGCTCAAGGAGTCGTAGTCAGAGTCCAGCAAAGGGCCCAGGTCAGAGCAGGAGTCCAAGTCCGAACCGAGATGGAAGGGAACCAGCCCGGGGTAGGTCCCCTAGTCAGTGA 750 0.5213 MRGRSYSPSPPPRHSRRGGGGRSPSPRGRYPPRPRQQDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRERRGRFNDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPAKRREYSRSVSPEDRRYSRERSFSQHSRERSYSRSPPYNGGSRSRSQSPAKGPGQSRSPSPNRDGREPARGRSPSQ* 250
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1583 249 SUPERFAMILY RNA-binding domain, RBD 40 147 IPR035979 GO:0003676
Gso14g1583 249 MobiDBLite consensus disorder prediction 120 249 - -
Gso14g1583 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 112 IPR000504 GO:0003723
Gso14g1583 249 MobiDBLite consensus disorder prediction 1 43 - -
Gso14g1583 249 PANTHER SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A 1 233 - -
Gso14g1583 249 MobiDBLite consensus disorder prediction 120 145 - -
Gso14g1583 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 119 IPR000504 GO:0003723
Gso14g1583 249 Gene3D - 33 149 IPR012677 -
Gso14g1583 249 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 233 - -
Gso14g1583 249 MobiDBLite consensus disorder prediction 202 235 - -
Gso14g1583 249 MobiDBLite consensus disorder prediction 162 201 - -
Gso14g1583 249 SMART rrm1_1 42 115 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso14g1583 Gso-Chr14 47787653 47790651 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1583 41 172 Eukaryotic Initiation Factors Gene Family AT4G34110 26.515 5.57e-10 57.4